Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam03g1808 ATGACGGACGAGCGCGGGTTTGTGTGGTGGTGGCTGGTATTGGCGTTCGGGATCCGACGGTCAGAAACCGCTTGTGACATCTGGTGCTTTACCCGCTGGAGCAGAGCCATGCCAAAGCCTTTGCTCCTTCTCTTTCTCTTATCACTGGCTTTTACCAAATGGGTTCATGCCTTTCTCCCCTATAACCTCTCTGATTCTTCTCTCTTCGACTCTTATGAAACCTCCTTTGCTGCTACCCTTAAACCTCTCATGGTGCCTCTCACTCTCATTCATGGAGCAGATGCAAAACAAGCAGTCTGTTTGGATGGCACTTTGCCTGGATATCACTTGCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTTGTTCAATTGGAGGGAGGTGGATGGTGTAACAATATTAGGAACTGTGTCTATCGTAAAACAACCAGGCGTGGATCATCAAGATTTATGGAGAAGCAGATACCATTTACTGGAATCCTGAGCAACAGAGCTGAAGAAAATCCTGATTTTTTTAATTGGAACAGAGTAAAGGTTCGTTACTGTGATGGTGCCTCTTTTACTGGGGATTCAGAAAACAAGGCTGCACAGTTGCAATTTAGAGGACAGCGGATTTGGTTGGCTGCCATGGAAGCATTGAGGGCAGAGGGAATGCGATTTGCTAAACAGGCCTTGCTTTCTGGATGCTCTGCTGGAGGTTTGGCATCTATTTTACACTGTGATGAGTTTAGAGACTTATTTCCAAGAACTACTAAAGTAAAATGTCTGAGTGATGCTGGATTATTCCTTGATGTGGCTGATATATCTGGAGGGCACTACATTAGAAACTTATTTGGAGGTGTGGTGGGCTTGCAGATTTTGGAAGCATATGATGGCATGGTCATGGAATCATGTCATATTGTGAAGATAGAAGTAGTAATGGGCACCATTCCTTATGTTTCCCTTCATATTGTGGAAATCATAAACGGTTTCCTCTTCCATCTGTTATATGCTGGTAATCAGGACTTTGGCGTTGCCAATATGTTAGCTGCATTGGTTATAAGTTCAGGAGCAGGAAGGAATCTGCCATCCATTTGTACGAGCCATCTCGATCCAACTTCGTGTTTCTTCCCACAAAATTTAATTGCTGGAATCAGAACCCCACTGTTTCTTGTCAACGCGGCATACGATTCCTGGCAGATACAATCCAGTATAGCCCCACCTTCTCTGGATCCAGCTGGGTATTGGCATGATTGTAGGCTGAATCATGCAAAATGTAACCAACCTCAGATTCAATTTCTTCAAGGATTCAGGAACCAAATGTTGAATGCTGTTAGCGATTTCTCAAAATCCTCTAAAAATGGGTTATTTATTAATTCATGTTTTGCTCACTGCCAAACTGAGAGACAGGACACATGGTTCGGCGACAATTCTCCTGTCATCGGAAACAAGCCAATTGCTCTGGCTGTTGGAGATTGGTACTTCGATAGAGCAGCGGTGAAAGCAATCGATTGTCCCTATCCTTGTGACAGGACTTGCCACCATCTGGCGAAGTCATATTGCAATTTGATTAAGAAGTCAATAAACAAGAAAGAAGAAGCTGCTGAGATGACAAATGTGATCTGCAGTCCTTCTGCAAACTTGTTTCAACATAGAAGAAAGGTTCGTATCATCATCCTCTAG 1662 43.86 MTDERGFVWWWLVLAFGIRRSETACDIWCFTRWSRAMPKPLLLLFLLSLAFTKWVHAFLPYNLSDSSLFDSYETSFAATLKPLMVPLTLIHGADAKQAVCLDGTLPGYHLHRGYGSGANSWLVQLEGGGWCNNIRNCVYRKTTRRGSSRFMEKQIPFTGILSNRAEENPDFFNWNRVKVRYCDGASFTGDSENKAAQLQFRGQRIWLAAMEALRAEGMRFAKQALLSGCSAGGLASILHCDEFRDLFPRTTKVKCLSDAGLFLDVADISGGHYIRNLFGGVVGLQILEAYDGMVMESCHIVKIEVVMGTIPYVSLHIVEIINGFLFHLLYAGNQDFGVANMLAALVISSGAGRNLPSICTSHLDPTSCFFPQNLIAGIRTPLFLVNAAYDSWQIQSSIAPPSLDPAGYWHDCRLNHAKCNQPQIQFLQGFRNQMLNAVSDFSKSSKNGLFINSCFAHCQTERQDTWFGDNSPVIGNKPIALAVGDWYFDRAAVKAIDCPYPCDRTCHHLAKSYCNLIKKSINKKEEAAEMTNVICSPSANLFQHRRKVRIIIL 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33194511 33200553 - CaPI482276_03g018080.1 Cam03g1808 124074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam03g1808 553 Pfam Pectinacetylesterase 338 491 IPR004963 GO:0016787(InterPro)
Cam03g1808 553 Pfam Pectinacetylesterase 81 286 IPR004963 GO:0016787(InterPro)
Cam03g1808 553 PANTHER NOTUM-RELATED 69 287 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g1808 Cam-Chr3:33194511 Cam07g1437 Cam-Chr7:28950564 8.70E-119 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam03g1808 K19882 - csv:101218273 481.1