Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0050 ATGGCGGATTTCCCAAGCTACATAATTCTCTTCCTCATATGGTTAGTTTCCACCTTCACAATTCGCTTCATCTTTGCCAAAAACAAACATAACTCTCGTCTTCCTCCAAGCCCTTTTGCTCTCCCCATCATCGGCCATCTCCATCTCCTCGGTCCGTTGCCCCACAAAGCTTTCCACAAGCTCTCGACCCGCCATGGACCCTTAATGCACCTCCGTTTAGGATCGGTCCCTTGCGTCGTAGTTTCGTCACCCGAAACAGCAAAGCAAATCCTCAAAACATTTGAATCTTCCTTCTCCAATAGACCCTATTTGTCAGCAGTTGACTATCTAACCTATGGCTTAGCTGATTTCTCCTTTGCTCCCTATGGACCTTATTGGAAGTTCATGAAGAAACTTTGTATGTCAGAGCTCCTCGGCGGCAGGACGCTCGACAGCCTCCGCCCCATGAGAGAGGACGAGATGCGGTGGTTTCTACGGTCATTGCAGTTGAAGGCCGCGGAGGGGAAAGAAGTTGATGTTGGAGGAGAGTTAATGAGGCTGAGCAACAATGTGATATCCAGAATGACATTGGGGAAAAGATGTGCTGAGGAAGAAGAAGAGGCTGAGGGGATAAGGAAATTAGTGAAGGATGTAGCTGAACTTTCAGGGACTTTTAATGTTTCAGATTATATTTGGTTTTGCAAGAATTTGGACTTGCAAGGGCTTGGGAAGAGGCTTAAGGAAGTTCATGAGAGGTTTGATGAGATGATGGAGAGAATGATAAAAGAACATGAAGAGAATAGTGGTGATGGGAAAGTGAAGGATTTGCTTGATATTTTGCTTCTTAAGTTTGGAGATCAAAACTCAGAGGTCAAGTTGACTAGAGAGAACATTAAGGCCTTTGTTATGGACATATTTACAGCAGGAACAGACGCATCAGCAATAACAATAGAATGGGCATTAGCAGAGCTAATAAACCATCCAAACATAATGGAGAAAGCAAGAGAAGAAGTTCACAGAGTTGTAGGAAAGAATAGAGTGATCGAAGAATCAGACATTGCCAATCTTCCTTATCTCCGAGCAATAGTAAAAGAGACCTTAAGGCTTCACTCAAGCCCATTGGTAGTAAGGGAATCAACTGAAAGTTGCACAATAAATGGTTATGAGATTCCACCAAAAACTCAAGTTTATGTGAATGTTTGGGCCATTGGGAGAGACCCAAATCACTGGGAAAACCCTCTTGAGTTTGAGCCGGAAAGGTTTATGGACAAAGAAGGGAGTGTGAATAGTGGTGATTTGAGAGGGCAAAATTTTCAGTTGTTGCCATTTGGGAGTGGGAGAAGAAGCTGTCCTGGAATAACTCTTGCTTTGCTAATGGTTCAGACAACTTTGGGTTGTATGATTCAATGCTTTGATTGGAAGGTTACTGGAGGAAATGGGAAAGTTGATATGGAAGAAGGGCCTGGCCTTACACTTCCTAGGGCACACCCTTTAGTTTGTGTTCCAAATCCTTGTCTAACTCCATTTCCACCACTTTGA 1518 43.68 MADFPSYIILFLIWLVSTFTIRFIFAKNKHNSRLPPSPFALPIIGHLHLLGPLPHKAFHKLSTRHGPLMHLRLGSVPCVVVSSPETAKQILKTFESSFSNRPYLSAVDYLTYGLADFSFAPYGPYWKFMKKLCMSELLGGRTLDSLRPMREDEMRWFLRSLQLKAAEGKEVDVGGELMRLSNNVISRMTLGKRCAEEEEEAEGIRKLVKDVAELSGTFNVSDYIWFCKNLDLQGLGKRLKEVHERFDEMMERMIKEHEENSGDGKVKDLLDILLLKFGDQNSEVKLTRENIKAFVMDIFTAGTDASAITIEWALAELINHPNIMEKAREEVHRVVGKNRVIEESDIANLPYLRAIVKETLRLHSSPLVVRESTESCTINGYEIPPKTQVYVNVWAIGRDPNHWENPLEFEPERFMDKEGSVNSGDLRGQNFQLLPFGSGRRSCPGITLALLMVQTTLGCMIQCFDWKVTGGNGKVDMEEGPGLTLPRAHPLVCVPNPCLTPFPPL 505
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 1456421 1458726 - CaPI482276_04g000500.1 Cam04g0050 124128
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0050 505 PANTHER CYTOCHROME P450 93A3-LIKE 8 496 - -
Cam04g0050 505 FunFam Cytochrome P450 family protein 26 493 - -
Cam04g0050 505 SUPERFAMILY Cytochrome P450 28 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 CDD CYP93 66 495 - -
Cam04g0050 505 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam04g0050 505 Gene3D Cytochrome P450 25 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam04g0050 505 Pfam Cytochrome P450 35 493 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0050 Cam-Chr4:1456421 Cam10g1696 Cam-Chr10:30974284 1.90E-168 dispersed
Cam11g1576 Cam-Chr11:28508279 Cam04g0050 Cam-Chr4:1456421 9.40E-77 dispersed
Cam04g0050 Cam-Chr4:1456421 Cam10g1423 Cam-Chr10:27907183 1.50E-117 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0050 K24188 - csv:101213143 892.493