Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0584 ATGGACGGAAAGGGAAATGGAATTGCCAATTTTGTTGAGGGAGCACAGCCTTACATTGCTATGATCTCTCTCCAATTTGGCTATGCTGGCATGAACATCATCACCAAGGTAGCTCTCAACCGTGGAATGAGCCATTACGTTCTTGTCACCTATCGACAAGCTTTTGCCACGGTTGCCCTCGCTCCGTTTGCCTTCTTCCTTGAAAGGAAAGTGAGACCCAAGGTTAGTTTCCCTATGTTGATGCAGATTTTCCTTCTGGGTTTGTTAGGGCCAGTGATTGATCAAAACTTTTATTATGCTGGACTGAAGCTTACTTCTCCTACCTTTTCATGTGCCATGAGCAATATGCTTCCTGCAATGACATTCATCTTGGCTCTTCTTTGTAGGATGGAGAAATTGGAGATGAAGAAAGTGAGATGCCAAGCAAAGGTGGTGGGAACATTGGTGACAGTGGGTGGAGCCATTTTGATGACTTTATACAAAGGGAATGTCATAAGCTTCTTTTGGTCTCACCATAATTATCTTCACTCAACTACTTCTTCCAATTACTACTCTTTTGAAAGCACTTATCAAGATTGGGTAAAGGGTTCCATTCTTCTCCTTTTTGCCAATCTTGCTTGGGCTTTGTTCTTCATCCTTCAGGCAATGACATTGAGGAATTACACAGCCCATCTTTCTCTTACAACCCTTGTGTGCTTCTTTGGGACTTTGCAATCCATGGCTGTCACATTTGTAATGGAAAACAAAGCTTCTGTATGGAACATTGGATGGGACATGAATCTTCTTGCTTCTGTTTATGCTGGAATAGTTTCATCAAGCATAGCTTATTATGTCCAAGGGATGATTATGCAAAAGAGAGGGCCTGTTTTTGTCACAGCCTTTACCCCTATGATCATGATCATTGTTGCCATAATGGGCTCCTTCATGCTTGCTGAGAAGATGTATATCGGACGTGTTGTTGGAGGTGTTGTAATGGTGGTGGGGCTGTACTCGGTGCTATGGGGGAAATACAAAGATTACAAAGAAAAGGAAGCAATAATAGAAGAAAGCACCATGGTCGAACCAGTGAAGCTTTTAATAAGTGGAGGCAAATTAGTTGAGAATAAGAAGAAAAAATTAGCAACAGTGGTTGAAGAAGAAGAAGAAGAAACGACATCAACATCATCAAACGACATTGAAATGCAAAGGAACAACACAACATCAAATGTCGACAATAATAATGTTTCAAAATTGCCTTGTCCTCCTCCACTACCCATTATTGTTGTTGTAGCTATGGATGAAGCACCACCAAAAGTTTGA 1299 41.26 MDGKGNGIANFVEGAQPYIAMISLQFGYAGMNIITKVALNRGMSHYVLVTYRQAFATVALAPFAFFLERKVRPKVSFPMLMQIFLLGLLGPVIDQNFYYAGLKLTSPTFSCAMSNMLPAMTFILALLCRMEKLEMKKVRCQAKVVGTLVTVGGAILMTLYKGNVISFFWSHHNYLHSTTSSNYYSFESTYQDWVKGSILLLFANLAWALFFILQAMTLRNYTAHLSLTTLVCFFGTLQSMAVTFVMENKASVWNIGWDMNLLASVYAGIVSSSIAYYVQGMIMQKRGPVFVTAFTPMIMIIVAIMGSFMLAEKMYIGRVVGGVVMVVGLYSVLWGKYKDYKEKEAIIEESTMVEPVKLLISGGKLVENKKKKLATVVEEEEEETTSTSSNDIEMQRNNTTSNVDNNNVSKLPCPPPLPIIVVVAMDEAPPKV 432
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 19635777 19639719 + CaPI482276_04g005840.1 Cam04g0584 124662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0584 432 PANTHER WAT1-RELATED PROTEIN 19 367 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam04g0584 432 MobiDBLite consensus disorder prediction 380 409 - -
Cam04g0584 432 MobiDBLite consensus disorder prediction 388 409 - -
Cam04g0584 432 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cam04g0584 432 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Cam04g0584 432 Pfam EamA-like transporter family 19 157 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0584 Cam-Chr4:19635777 Cam11g1347 Cam-Chr11:26181227 4.70E-120 dispersed
Cam01g1110 Cam-Chr1:16888676 Cam04g0584 Cam-Chr4:19635777 3.00E-68 transposed
Cam02g1534 Cam-Chr2:28309157 Cam04g0584 Cam-Chr4:19635777 4.50E-71 transposed
Cam06g0699 Cam-Chr6:9373384 Cam04g0584 Cam-Chr4:19635777 8.00E-73 transposed
Cam06g1129 Cam-Chr6:21018517 Cam04g0584 Cam-Chr4:19635777 6.10E-63 transposed
Cam07g0993 Cam-Chr7:24187641 Cam04g0584 Cam-Chr4:19635777 3.30E-48 transposed
Cam10g1612 Cam-Chr10:29909522 Cam04g0584 Cam-Chr4:19635777 7.50E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0584 - - - 0.0