Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0632 ATGAGGCTACAATCCCTTTTTGCAGCATCATCTTTACTCTTACTCATATATTTTCTCTCCTTCATTGCGGCTGATCTAAACTCAGACCGGCAAGCTCTTCTGGAGTTTATTTCAACAGTTCCCCATGGTCGGAAAATTAACTGGGATCCATCTACCCCGGTCTGCACTACATGGGTTGGCGTCACTTGTACTTCAGACCTCTCTAATGTGCTTGCTCTCAGGCTGCCTGCTGTTGGACTGTATGGTCCGATCCCGGCCAATACACTTGGAAAGTTAGATGCCCTTAGAACTTTGAGTCTTCGATCTAATAATCTTAATGGAAATCTTCCATCAGATGTGCTATCCCTTCCCTCCCTAAAGTTTATATATCTTCAACACAATAACTTTTCTGGTAAAATACCTTCTTCCCTGTCGCCTAGCCTTACCTTCCTTGATCTGTCCTTCAACTCTCTCACTGGAAACATTCCGAAATCAATACAAAATTTAACGCACCTCACTGGCCTAAACGTCCAAAACAACTCCCTGACTGGATCCATTCCTGATATAGGTCACCTAAAGCTTAAGCAATTGAACTTGAGCTACAACCATCTTAGCGGTCCCATTCCTGCTTCACTGCAATCATTTCCTACTTCTTCCTTTGAAGGGAACTCACTGCTATGTGGCTCGCCACTTAAAAATTGCTCAGTTGGTGCCCCCTTACCTTCTCCATCTCCTGTTTCTTTGCCCCCACCAAAGAAAAAGAGCAAAAAGAAAATAAATATTGGAGCTATTGTTGCCATCGCCTTAGGTGGTGCTGCCGTGCTCTTCCTCCTCATGTTATTGATTGTTGTCTGCTGTATGAAGCGAAAAGATGGTGAAGGTAGTGCTGCTGCTGTGAAAGGAAAGGGTAAAAGGACTGAGCAACCGAAGGAGGATTTCGGAAGCGGGGTACAAGAGCCTGAGAAAAACAGGCTGGTTTTCTTTGAAGGCTGTTCTTATAATTTTGATCTTGAGGACTTGTTAAGGGCGTCTGCTGAAGTGCTCGGAAAAGGGAGTTATGGAACTACTTACAAGGCAATCTTGGAGGAAGGAGTAACAGTGGTAGTAAAGAGGTTGAAGGAAGTGGTGGCTGGGAAAAAGGAATTTGATCAACAAATGGAGATTGTTGGGAGGATGGGCCAGCATCCAAACGTCGTGCCTCTCCGTGCCTATTACTATTCAAAAGATGAGAAGCTTTTGGTTTACGACTATGCCGTTGCTGGAAGCTTTTCAGCATTACTCCGTGGAAGCCGAGAAGGTGGACGAGCGCCACCGGACTGGGAAACAAGATTGAAGGTTTCCTTGGGGTGTGCCAAAGGGCTTGCACATATCCATTCAGCAAGTGGGGGGAAATTCATCCATGGCAACATAAAGTCCTCTAACATCCTTCTCACACAAGACCTGAATGGTTGTATTTCAGATTTTGGCCTGACTCCTTTGATGAACTCCCCTGCCATTCCCTCTAGAAGCGTAGGTTATCGTGCTCCAGAGGTGATCGAGACTCGAAAATCAACTCAAAAGTCAGATGTTTACAGTTTTGGAGTTGTTTTGCTAGAGATGTTGACTGGGAAAGCACCATCCCAATCGCCCGGCCGCGACGATGTTATGGACCTTCCGAGATGGGTCCAGTCTGTGGTAAGAGAGGAATGGACATCTGAGGTGTTTGATGTAGAGCTAATGAAGTATCAGAACATTGAAGAAGAGCTTGTTCAAATGCTCCAAATAGCAATGGCTTGCGTGTCTCGAGTGCCAGATATGAGACCAACGATGGAAGAAGTAGTTAGGATGATCGAGGAAATCCGACAATTAGACTCAGGAACTCGACCATCATCAGAAGATAACAAAGCTGGGGATGGGGACGATGACTTGAATACTCAGACCTTGTAA 1905 45.35 MRLQSLFAASSLLLLIYFLSFIAADLNSDRQALLEFISTVPHGRKINWDPSTPVCTTWVGVTCTSDLSNVLALRLPAVGLYGPIPANTLGKLDALRTLSLRSNNLNGNLPSDVLSLPSLKFIYLQHNNFSGKIPSSLSPSLTFLDLSFNSLTGNIPKSIQNLTHLTGLNVQNNSLTGSIPDIGHLKLKQLNLSYNHLSGPIPASLQSFPTSSFEGNSLLCGSPLKNCSVGAPLPSPSPVSLPPPKKKSKKKINIGAIVAIALGGAAVLFLLMLLIVVCCMKRKDGEGSAAAVKGKGKRTEQPKEDFGSGVQEPEKNRLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGVTVVVKRLKEVVAGKKEFDQQMEIVGRMGQHPNVVPLRAYYYSKDEKLLVYDYAVAGSFSALLRGSREGGRAPPDWETRLKVSLGCAKGLAHIHSASGGKFIHGNIKSSNILLTQDLNGCISDFGLTPLMNSPAIPSRSVGYRAPEVIETRKSTQKSDVYSFGVVLLEMLTGKAPSQSPGRDDVMDLPRWVQSVVREEWTSEVFDVELMKYQNIEEELVQMLQIAMACVSRVPDMRPTMEEVVRMIEEIRQLDSGTRPSSEDNKAGDGDDDLNTQTL 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20340382 20342389 + CaPI482276_04g006320.1 Cam04g0632 124710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0632 634 FunFam Probable inactive receptor kinase RLK902 26 182 - -
Cam04g0632 634 SUPERFAMILY Protein kinase-like (PK-like) 339 604 IPR011009 -
Cam04g0632 634 PANTHER OS05G0588300 PROTEIN 12 618 IPR050994 -
Cam04g0632 634 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Cam04g0632 634 MobiDBLite consensus disorder prediction 289 310 - -
Cam04g0632 634 Pfam Protein kinase domain 339 601 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0632 634 SUPERFAMILY L domain-like 39 225 - -
Cam04g0632 634 FunFam pollen receptor-like kinase 1 303 410 - -
Cam04g0632 634 Pfam Leucine Rich Repeat 118 138 IPR001611 GO:0005515(InterPro)
Cam04g0632 634 Pfam Leucine Rich Repeat 140 162 IPR001611 GO:0005515(InterPro)
Cam04g0632 634 Pfam Leucine Rich Repeat 95 114 IPR001611 GO:0005515(InterPro)
Cam04g0632 634 Pfam Leucine Rich Repeat 186 207 IPR001611 GO:0005515(InterPro)
Cam04g0632 634 Gene3D Ribonuclease Inhibitor 187 227 IPR032675 -
Cam04g0632 634 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 411 617 - -
Cam04g0632 634 Gene3D Ribonuclease Inhibitor 26 183 IPR032675 -
Cam04g0632 634 ProSitePatterns Protein kinases ATP-binding region signature. 341 372 IPR017441 GO:0005524(InterPro)
Cam04g0632 634 Gene3D Phosphorylase Kinase; domain 1 302 410 - -
Cam04g0632 634 Gene3D Transferase(Phosphotransferase) domain 1 413 627 - -
Cam04g0632 634 MobiDBLite consensus disorder prediction 606 634 - -
Cam04g0632 634 CDD STKc_IRAK 341 606 - -
Cam04g0632 634 ProSiteProfiles Protein kinase domain profile. 335 606 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0632 634 MobiDBLite consensus disorder prediction 606 626 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1963 Cam-Chr2:32744011 Cam04g0632 Cam-Chr4:20340382 1.30E-179 dispersed
Cam04g0632 Cam-Chr4:20340382 Cam06g1167 Cam-Chr6:22363903 2.10E-132 dispersed
Cam04g0632 Cam-Chr4:20340382 Cam11g0283 Cam-Chr11:4305745 3.60E-137 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85111 PF00069 Pkinase 7.10E-38 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0632 - - - 0.0