Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0636 ATGAAGGAAATTCATAAATCCCGTCTTGCATTTGCATTTGCTTCTATCTCTGTTTTCGTTTGCTTGTTCTTCGATGTCCATGTGGTTTTAGCAGACAATTACATCCCTCGGGATTTCATCCTCCTTGATTGTGGAGGGCCTTCAACTGCTAACGACATCGATGGCCGGAAATGGTATACCGATGACAAATCTAAGTTTGTTCCGGCGACAGGGAATAGCATCGTATCGAAAGCCGCTACTCAGGATCCTTCAGTTCCTGATATCCCTTTCATGACGGCTAGGGTTTTCAGCTCTAATTTCACCTACAGCTTTCCTGTGGCTCCTAGTCGTTTATTCGTTCGTCTCTACTTTTATCCTTCTTCTTATGGTGGACTTAATGCATCTGATGCTCTTTTCTCTGTTTCCACTCCGTCCTATACTCTTCTTAAGAACTTCAGCGCTTCACAAACTGCTGAGGCTTTGAATTATGCCTATATCATTAAGGAATACTCTATCCATGTTGATGGTGATAGGTTAAACTTGACTTTCATTCCATCCTCTAGTCATCCAAAGGCTTATGCATTTGTGAATGGGATTGAGATTGTATCTATGGCTGATATTTACAGTGATACTTCTGGGAGTACTCTGATTGTTGGCCCATCTACTCCATTCACTGTGGACAATGCCACTGCGCTTGAGAATGTTTATCGGTTGAATGTCGGGGGGAATGATATTTCACCTTCTGGTGATACGGGGATGTATAGGTCTTGGTTTGATGACACTCCATACTTGTATGGTGCAGCACAGGGAGTGACGATGAGTACTGATCAGAACACAACGCTTAATTATCTGCCGAATATTCTTACTTATGTTGCGCCGGAAAATGTCTACTCCACTGCTAGAGCAATGGGACCTGATAACAATGTCAATCTGAATTATAACTTGACATGGATTTTCCCTGTTGACACTGGGTTCTTTTATCTTGTTAGGCTCCATTTTTGTGAGGTTGCTGCAAATATCACAAAAATTAACCAAAGAGTGTTCGACATTTTCCTCTTTAATCAAACTGCTATGCAGGGTGCTGACGTGATTGCCTGGGCTGGAAGTAATGATACTCCTGTGTACAAAGATTATGTGGTTTTCGTTCCTGCTAATGGAAGTCCGCAGCAGGATTTATGGCTCGAACTCCATCCAGACAAGTCCATGGTCCCCAATTACTATGATGCAATCTTGAATGGTGTGGAGATATTCAAAATTAATGACTCGAGCGCTAATCTTGCTGGGCCAAATCCTATTCCTGCGCCAGTACAGAAAATTATTGATCCATCATTAGCTAAGCCAGCATCTTCTCATGGTAAATCAAAGAAGTCAGGGGTGATTGCTGGAGTTGTTTGTGGAGCAGTTGTTTTAGCTCTGATCATTGGTTTCTTTGTTGTTGCTAAACGTCGCCGTGGGCATGGGAAAGATTCAAGTACTGTTGAAGGACCGTCAGGATGGCTACCTCTTTCTCTCTATGGAAATTCCCATTCGGCTGGATCTGCTAAGACAAATACAACTGGAAGCTATACATCCTCCCTGCCTTCCAATCTTTGCCGCCACTTCTCGTTTTCTGAGATCAAGGCTGCCACAAGGGACTTTGATGAATCTTTACTACTTGGAGTTGGTGGTTTTGGCAAAGTTTACAAGGGAGAAATTGATGGTGGGACTACAAAAGTTGCCATCAAGCGAGGGAACCCTCTTTCCGAGCAAGGTGTGCATGAGTTTCAAACTGAGATTGAAATGCTCTCTAAGCTTCGCCATCGCCACCTTGTTTCATTGATTGGCTACTGTGAAGAGAATTGTGAAATGATCCTGGTTTATGATTACATGGCTCATGGAACACTGCGAGAACATCTATACAAGACTCACAAGCCACCGTTGTCTTGGAGGCAAAGGCTCGAGATATGCATTGGAGCTGCCCGTGGTCTGCATTATCTCCACACTGGTGCCAAATATACAATTATTCATCGAGATGTGAAGACAACCAACATCCTTTTGGACGAAAAGTGGGTAGCAAAAGTATCCGATTTCGGGTTGTCGAAAACTGGTCCTACTTTGGATCACACACATGTTAGCACTGTTGTGAAAGGTAGTTTCGGATACTTGGATCCTGAATACTTTAGGCGACAGCAATTGACCGACAAATCAGATGTTTACTCCTTCGGAGTCGTTCTCTTTGAAGTCCTATGTGCTCGGCCAGCCTTGAACCCAACACTCCCCAAGGAGCAAGTGAGTTTAGCCGAATGGGCTGCACACTGCTACAACAAAGGCATTTTAGATCAGATAATCGACACATTCCTAAAGGGGAAGATCGCATCGGAGTGTCTCAAGAAGTTCGCCGAGACAGCAATGAAATGTGTGTCTGATCAGGGCATCGACAGGCCATCAATGGGTGACGTTCTCTGGAATCTAGAGTTTGCATTGCAGCTGCAGGAGAGCGCAGAAGAGAGTGGCAAGGTAGGCAGTGGGATAGAAGTGGAAGGAGGTCAGCTCGACGTAGTTTACAAAGGGAAGAAGGATCCAGACGCTTCCCCTGGCATCGATGGAAACATAACCGACTCAAGAAGCACCGGAATCAGTATGAGCATTGGAAGCCGGAGTCTTGCCAGTGAAGATTCGGACGGGTTGACGCCAAGTGCCGTCTTCTCACAGATTATGAACCCAAAAGGTCGTTAA 2694 44.62 MKEIHKSRLAFAFASISVFVCLFFDVHVVLADNYIPRDFILLDCGGPSTANDIDGRKWYTDDKSKFVPATGNSIVSKAATQDPSVPDIPFMTARVFSSNFTYSFPVAPSRLFVRLYFYPSSYGGLNASDALFSVSTPSYTLLKNFSASQTAEALNYAYIIKEYSIHVDGDRLNLTFIPSSSHPKAYAFVNGIEIVSMADIYSDTSGSTLIVGPSTPFTVDNATALENVYRLNVGGNDISPSGDTGMYRSWFDDTPYLYGAAQGVTMSTDQNTTLNYLPNILTYVAPENVYSTARAMGPDNNVNLNYNLTWIFPVDTGFFYLVRLHFCEVAANITKINQRVFDIFLFNQTAMQGADVIAWAGSNDTPVYKDYVVFVPANGSPQQDLWLELHPDKSMVPNYYDAILNGVEIFKINDSSANLAGPNPIPAPVQKIIDPSLAKPASSHGKSKKSGVIAGVVCGAVVLALIIGFFVVAKRRRGHGKDSSTVEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFSEIKAATRDFDESLLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENCEMILVYDYMAHGTLREHLYKTHKPPLSWRQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDHTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPALNPTLPKEQVSLAEWAAHCYNKGILDQIIDTFLKGKIASECLKKFAETAMKCVSDQGIDRPSMGDVLWNLEFALQLQESAEESGKVGSGIEVEGGQLDVVYKGKKDPDASPGIDGNITDSRSTGISMSIGSRSLASEDSDGLTPSAVFSQIMNPKGR 897
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 20366640 20369333 - CaPI482276_04g006360.1 Cam04g0636 124714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0636 897 ProSiteProfiles Protein kinase domain profile. 539 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0636 897 MobiDBLite consensus disorder prediction 843 897 - -
Cam04g0636 897 ProSitePatterns Protein kinases ATP-binding region signature. 545 568 IPR017441 GO:0005524(InterPro)
Cam04g0636 897 Pfam Malectin-like domain 42 412 IPR024788 -
Cam04g0636 897 Gene3D Transferase(Phosphotransferase) domain 1 616 829 - -
Cam04g0636 897 FunFam FERONIA receptor-like kinase 39 198 - -
Cam04g0636 897 Pfam Protein tyrosine and serine/threonine kinase 545 807 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g0636 897 Gene3D Phosphorylase Kinase; domain 1 524 615 - -
Cam04g0636 897 PANTHER OS03G0124300 PROTEIN-RELATED 16 477 IPR045272 GO:0004714(InterPro)|GO:0006468(InterPro)
Cam04g0636 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g0636 897 SUPERFAMILY Protein kinase-like (PK-like) 512 812 IPR011009 -
Cam04g0636 897 CDD STKc_IRAK 545 811 - -
Cam04g0636 897 FunFam FERONIA receptor-like kinase 223 413 - -
Cam04g0636 897 Gene3D - 224 413 - -
Cam04g0636 897 Gene3D - 39 198 - -
Cam04g0636 897 FunFam Receptor-like protein kinase FERONIA 616 826 - -
Cam04g0636 897 MobiDBLite consensus disorder prediction 855 890 - -
Cam04g0636 897 SMART serkin_6 539 813 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0636 897 FunFam Receptor-like protein kinase FERONIA 511 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g2108 Cam-Chr1:34046757 Cam04g0636 Cam-Chr4:20366640 8.40E-64 dispersed
Cam04g0636 Cam-Chr4:20366640 Cam07g1613 Cam-Chr7:30753843 2.30E-217 dispersed
Cam11g0720 Cam-Chr11:8948325 Cam04g0636 Cam-Chr4:20366640 9.70E-42 dispersed
Cam02g1736 Cam-Chr2:30412568 Cam04g0636 Cam-Chr4:20366640 1.70E-238 transposed
Cam10g2256 Cam-Chr10:35750819 Cam04g0636 Cam-Chr4:20366640 2.20E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85112 PF12819 Malectin_like 1.10E-39 CL0202 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0636 - - - 0.0