Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0686 ATGGCCACAAGCGTCTCGCACTCTCCCGATTTCCGCCCAGAAGTTTCAGTTCCGCCGCCGACCCATGACGGCCTTTACTTCTGGCAGTTCATGATCGCCGGGTCAATTGCAGGGTCGGTCGAGCACATGGCGATGTATCCAGTGGACACTCTCAAGACCCGAATACAAGCCCTCGGCGGCGGATCGTCAACAGTCCGACAAGCACTCGGCTCGATTCTGAAGGTGGAAGGTCCGGCAGGGCTCTACCGTGGAATTGGAGCAATGGGTTTGGGAGCAGGACCTGCACACGCAGTCTATTTCTCAGTGTATGAGTTTTGCAAAGAAGGGTTTTCAATGGGAAATAACAACAACCCATTAACGCACGCCATTGCTGGAGTTTGTGCGACGGTGACGAGCGACGCGGTGATAACGCCGATGGATGTGGTGAAACAGAGGCTGCAGTTGAAGAGCAGTCCTTATAAAGGGGTGGGAGAGTGTGTGAGGAGGATTTTGGTTGAGGAAGGAATTGGGGCGCTGTATGCCTCTTATCGGACGACGGTTGTGATGAACGCACCGTATACGGCGGTGTATTTTGCGACTTATGAAGCTGCAAAAAGGGGATTGAAGGAGGTTTCACTGGGAAGTGACAACGATGAGAGGCTGATTGTTCATGCTACGGCTGGTGCGGCAGCTGGGTCTCTTGCTGCTGCTCTTACAACGCCATTAGACGTTGTGAAAACTCGGCTGCAGTGCCAGGGAGTATGTGGTTGCGACAAATTTTCAAGCAGTTCAATTGGGTACGTACTTGGTTGTGTAGTGAAGAAAGACGGCTACAGTGGGCTGATGAAGGGATGGATTCCAAGGATGATGTTCCATGCCCCTGCTGCTGCAATTTGCTGGTCCACTTATGAGGCTTCAAAAACCTTCTTTCAACATCTCCACAATGACAACAATTAG 936 51.82 MATSVSHSPDFRPEVSVPPPTHDGLYFWQFMIAGSIAGSVEHMAMYPVDTLKTRIQALGGGSSTVRQALGSILKVEGPAGLYRGIGAMGLGAGPAHAVYFSVYEFCKEGFSMGNNNNPLTHAIAGVCATVTSDAVITPMDVVKQRLQLKSSPYKGVGECVRRILVEEGIGALYASYRTTVVMNAPYTAVYFATYEAAKRGLKEVSLGSDNDERLIVHATAGAAAGSLAAALTTPLDVVKTRLQCQGVCGCDKFSSSSIGYVLGCVVKKDGYSGLMKGWIPRMMFHAPAAAICWSTYEASKTFFQHLHNDNN 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21157919 21159929 - CaPI482276_04g006860.1 Cam04g0686 124764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0686 311 PANTHER MITOFERRIN-1-RELATED 20 305 - GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER)
Cam04g0686 311 SUPERFAMILY Mitochondrial carrier 23 297 IPR023395 -
Cam04g0686 311 Gene3D Mitochondrial carrier domain 111 311 IPR023395 -
Cam04g0686 311 Pfam Mitochondrial carrier protein 213 305 IPR018108 -
Cam04g0686 311 Pfam Mitochondrial carrier protein 25 111 IPR018108 -
Cam04g0686 311 Pfam Mitochondrial carrier protein 116 203 IPR018108 -
Cam04g0686 311 PRINTS Mitochondrial carrier protein signature 173 191 IPR002067 GO:0055085(InterPro)
Cam04g0686 311 PRINTS Mitochondrial carrier protein signature 30 43 IPR002067 GO:0055085(InterPro)
Cam04g0686 311 PRINTS Mitochondrial carrier protein signature 43 57 IPR002067 GO:0055085(InterPro)
Cam04g0686 311 PRINTS Mitochondrial carrier protein signature 131 149 IPR002067 GO:0055085(InterPro)
Cam04g0686 311 PRINTS Mitochondrial carrier protein signature 221 243 IPR002067 GO:0055085(InterPro)
Cam04g0686 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 25 109 IPR018108 -
Cam04g0686 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 200 IPR018108 -
Cam04g0686 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 302 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g1998 Cam-Chr2:33038550 Cam04g0686 Cam-Chr4:21157919 1.70E-122 dispersed
Cam04g0686 Cam-Chr4:21157919 Cam06g1702 Cam-Chr6:28401047 1.40E-28 dispersed
Cam04g0686 Cam-Chr4:21157919 Cam08g1174 Cam-Chr8:18069576 7.70E-32 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0686 K15113 - csv:101210464 592.808