Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g0686 | ATGGCCACAAGCGTCTCGCACTCTCCCGATTTCCGCCCAGAAGTTTCAGTTCCGCCGCCGACCCATGACGGCCTTTACTTCTGGCAGTTCATGATCGCCGGGTCAATTGCAGGGTCGGTCGAGCACATGGCGATGTATCCAGTGGACACTCTCAAGACCCGAATACAAGCCCTCGGCGGCGGATCGTCAACAGTCCGACAAGCACTCGGCTCGATTCTGAAGGTGGAAGGTCCGGCAGGGCTCTACCGTGGAATTGGAGCAATGGGTTTGGGAGCAGGACCTGCACACGCAGTCTATTTCTCAGTGTATGAGTTTTGCAAAGAAGGGTTTTCAATGGGAAATAACAACAACCCATTAACGCACGCCATTGCTGGAGTTTGTGCGACGGTGACGAGCGACGCGGTGATAACGCCGATGGATGTGGTGAAACAGAGGCTGCAGTTGAAGAGCAGTCCTTATAAAGGGGTGGGAGAGTGTGTGAGGAGGATTTTGGTTGAGGAAGGAATTGGGGCGCTGTATGCCTCTTATCGGACGACGGTTGTGATGAACGCACCGTATACGGCGGTGTATTTTGCGACTTATGAAGCTGCAAAAAGGGGATTGAAGGAGGTTTCACTGGGAAGTGACAACGATGAGAGGCTGATTGTTCATGCTACGGCTGGTGCGGCAGCTGGGTCTCTTGCTGCTGCTCTTACAACGCCATTAGACGTTGTGAAAACTCGGCTGCAGTGCCAGGGAGTATGTGGTTGCGACAAATTTTCAAGCAGTTCAATTGGGTACGTACTTGGTTGTGTAGTGAAGAAAGACGGCTACAGTGGGCTGATGAAGGGATGGATTCCAAGGATGATGTTCCATGCCCCTGCTGCTGCAATTTGCTGGTCCACTTATGAGGCTTCAAAAACCTTCTTTCAACATCTCCACAATGACAACAATTAG | 936 | 51.82 | MATSVSHSPDFRPEVSVPPPTHDGLYFWQFMIAGSIAGSVEHMAMYPVDTLKTRIQALGGGSSTVRQALGSILKVEGPAGLYRGIGAMGLGAGPAHAVYFSVYEFCKEGFSMGNNNNPLTHAIAGVCATVTSDAVITPMDVVKQRLQLKSSPYKGVGECVRRILVEEGIGALYASYRTTVVMNAPYTAVYFATYEAAKRGLKEVSLGSDNDERLIVHATAGAAAGSLAAALTTPLDVVKTRLQCQGVCGCDKFSSSSIGYVLGCVVKKDGYSGLMKGWIPRMMFHAPAAAICWSTYEASKTFFQHLHNDNN | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 21157919 | 21159929 | - | CaPI482276_04g006860.1 | Cam04g0686 | 124764 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g0686 | 311 | PANTHER | MITOFERRIN-1-RELATED | 20 | 305 | - | GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER) | |
Cam04g0686 | 311 | SUPERFAMILY | Mitochondrial carrier | 23 | 297 | IPR023395 | - | |
Cam04g0686 | 311 | Gene3D | Mitochondrial carrier domain | 111 | 311 | IPR023395 | - | |
Cam04g0686 | 311 | Pfam | Mitochondrial carrier protein | 213 | 305 | IPR018108 | - | |
Cam04g0686 | 311 | Pfam | Mitochondrial carrier protein | 25 | 111 | IPR018108 | - | |
Cam04g0686 | 311 | Pfam | Mitochondrial carrier protein | 116 | 203 | IPR018108 | - | |
Cam04g0686 | 311 | PRINTS | Mitochondrial carrier protein signature | 173 | 191 | IPR002067 | GO:0055085(InterPro) | |
Cam04g0686 | 311 | PRINTS | Mitochondrial carrier protein signature | 30 | 43 | IPR002067 | GO:0055085(InterPro) | |
Cam04g0686 | 311 | PRINTS | Mitochondrial carrier protein signature | 43 | 57 | IPR002067 | GO:0055085(InterPro) | |
Cam04g0686 | 311 | PRINTS | Mitochondrial carrier protein signature | 131 | 149 | IPR002067 | GO:0055085(InterPro) | |
Cam04g0686 | 311 | PRINTS | Mitochondrial carrier protein signature | 221 | 243 | IPR002067 | GO:0055085(InterPro) | |
Cam04g0686 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 25 | 109 | IPR018108 | - | |
Cam04g0686 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 116 | 200 | IPR018108 | - | |
Cam04g0686 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 212 | 302 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g1998 | Cam-Chr2:33038550 | Cam04g0686 | Cam-Chr4:21157919 | 1.70E-122 | dispersed | |
Cam04g0686 | Cam-Chr4:21157919 | Cam06g1702 | Cam-Chr6:28401047 | 1.40E-28 | dispersed | |
Cam04g0686 | Cam-Chr4:21157919 | Cam08g1174 | Cam-Chr8:18069576 | 7.70E-32 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g0686 | K15113 | - | csv:101210464 | 592.808 |