Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0761 ATGTTTAAAATGGCAGAGCATGTTCAAGTGTTTGGTTTCTGGGAAAGTGCGTTCAGTCGGCGAGTGGAGTTAGCTCTCAAACTCAAAGGCGTCGAATACCAATACTTTGAGGAAGATTTACCCCACAACAAGAGCCATTTGCTGCTGAAATACAATCCAATTTACAAGAAAGTGCCTGTTCTACTCCACCATGGAAAACCCATTGCAGAGTCTCTTGTAATCCTTGAATACATTGATGAAATCTGGAAAACCAATCCCATTTTACCCCAACATCCCCATCAAAGAGCTCTTTCCAGGTTCTGGGCTAAGTTTATCGATGACAAGGTTGTGTGTGCAGTAGTGAAGGCTGCTGGAAGCAAAGAAGAAGAGAGAAAGAAAGCTATAGAGGAAGCAAGGGAGGCATTGGAAGCACTTGAGAAAGAGCTTAAAAGCAACAACTTCTTTGGAGGAGAAGAAATTGGGTTTGTGGACATTGTTGGGACTGTGATAGCTGGTTGGGTTCCTGCCATTGAAGAATGCTTTGGGTTTGAGCTGCTCACAACTAATAACTTCCCTAACCTAATCAAATGGAGTGAACAGCTTCTTAACCATGCTGTTGTAAACCAGATTCTGCCTCCAAAAAATGAGATTGTTTCCTTTATGCAAGCTAATTGGAAAGTTTGA 663 42.08 MFKMAEHVQVFGFWESAFSRRVELALKLKGVEYQYFEEDLPHNKSHLLLKYNPIYKKVPVLLHHGKPIAESLVILEYIDEIWKTNPILPQHPHQRALSRFWAKFIDDKVVCAVVKAAGSKEEERKKAIEEAREALEALEKELKSNNFFGGEEIGFVDIVGTVIAGWVPAIEECFGFELLTTNNFPNLIKWSEQLLNHAVVNQILPPKNEIVSFMQANWKV 220
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 21989190 21990413 + CaPI482276_04g007610.1 Cam04g0761 124839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0761 220 Gene3D - 88 220 - -
Cam04g0761 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 220 IPR010987 -
Cam04g0761 220 CDD GST_N_Tau 8 82 - -
Cam04g0761 220 Pfam Glutathione S-transferase, C-terminal domain 101 196 IPR004046 -
Cam04g0761 220 SUPERFAMILY GST C-terminal domain-like 80 218 IPR036282 -
Cam04g0761 220 FunFam Tau class glutathione S-transferase 88 220 - -
Cam04g0761 220 SFLD Main.3: Omega- and Tau-like 4 216 IPR045073 -
Cam04g0761 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 7 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cam04g0761 220 SUPERFAMILY Thioredoxin-like 8 109 IPR036249 -
Cam04g0761 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 86 IPR004045 -
Cam04g0761 220 CDD GST_C_Tau 92 216 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam04g0761 220 FunFam Tau class glutathione S-transferase 3 90 - -
Cam04g0761 220 Pfam Glutathione S-transferase, N-terminal domain 8 80 IPR004045 -
Cam04g0761 220 SFLD Glutathione Transferase (cytosolic) 4 216 IPR040079 -
Cam04g0761 220 Coils Coil 117 145 - -
Cam04g0761 220 Gene3D Glutaredoxin 1 87 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0761 Cam-Chr4:21989190 Cam04g0776 Cam-Chr4:22073507 6.80E-83 dispersed
Cam04g0760 Cam-Chr4:21986415 Cam04g0761 Cam-Chr4:21989190 2.90E-73 tandem
Cam04g0761 Cam-Chr4:21989190 Cam04g0762 Cam-Chr4:21993102 4.20E-48 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0761 K00799 - csv:105435246 350.903