Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0773 ATGGGAGAAGAAGAAGTGCAGGTGTTTGGTTTCCGGTCAGGTCCGTATAGTCTGAGAGTGGAATTGGCTCTGAAACTCAAAGGAGTTGCTTATCAACACATTGACGAGGATTTGGTGAACAAAAAGAGCGATTTGCTGTTGAAATACAACCCAATTTACAAGAAAGTGCCGGTTCTTGTTCACCATGGGAAGTCCATTTCAGAGTCTCTTGTAATCCTTGAATACATCGAAGAAAAATGGAGAGAAAATTATCTAATCTTGCCCCAAGATCCCCATCAAAGAGCTCTTGCCAGATTTTGGGCTAAGTACATTGATGACAAGGTAGTGCCTGCAGTGCAGAAAGCTGCAAGAAGCAAAGAAGAAGAGAGAGAGAAGAGCATAGAAGAAGCTCAGGAGACATTGGAACCACTTGAGAAAGAGCTTAAAAACAAGTTGTTCTTTGGAGGAGACAAAATTGGATTTGTGGACATTGTAGGCCTGGTTTTAGCTTGCTGGATTCCTGCCACTGAAGAAGCTGTAGGCTTTGAGCTGCTATCAACCCACAAATTTCCAAATCTAACCAAATGGGCTCAACATTTTGTGAACCACAGCGTTGCAAAGGAAGTTTTGCCTCAAAAAGATGTTCTTGTTGCCTTCTTGAAGAATGTTGTGTTTGTTCCAAAAAACTAG 669 41.85 MGEEEVQVFGFRSGPYSLRVELALKLKGVAYQHIDEDLVNKKSDLLLKYNPIYKKVPVLVHHGKSISESLVILEYIEEKWRENYLILPQDPHQRALARFWAKYIDDKVVPAVQKAARSKEEEREKSIEEAQETLEPLEKELKNKLFFGGDKIGFVDIVGLVLACWIPATEEAVGFELLSTHKFPNLTKWAQHFVNHSVAKEVLPQKDVLVAFLKNVVFVPKN 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22058581 22059593 - CaPI482276_04g007730.1 Cam04g0773 124851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0773 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 84 IPR004045 -
Cam04g0773 222 Gene3D Glutaredoxin 1 89 - -
Cam04g0773 222 SFLD Main (cytGST) 2 215 - -
Cam04g0773 222 Pfam Glutathione S-transferase, C-terminal domain 99 195 IPR004046 -
Cam04g0773 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 214 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cam04g0773 222 Pfam Glutathione S-transferase, N-terminal domain 5 78 IPR004045 -
Cam04g0773 222 SUPERFAMILY Thioredoxin-like 6 109 IPR036249 -
Cam04g0773 222 FunFam Glutathione S-transferase GSTU6 1 87 - -
Cam04g0773 222 CDD GST_C_Tau 91 214 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam04g0773 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 210 IPR010987 -
Cam04g0773 222 FunFam Tau class glutathione S-transferase 87 218 - -
Cam04g0773 222 CDD GST_N_Tau 6 80 - -
Cam04g0773 222 SUPERFAMILY GST C-terminal domain-like 80 215 IPR036282 -
Cam04g0773 222 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Cam04g0773 222 Coils Coil 120 140 - -
Cam04g0773 222 Gene3D - 90 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0760 Cam-Chr4:21986415 Cam04g0773 Cam-Chr4:22058581 1.40E-67 dispersed
Cam04g0773 Cam-Chr4:22058581 Cam04g0776 Cam-Chr4:22073507 2.20E-81 dispersed
Cam04g0773 Cam-Chr4:22058581 Cam04g0774 Cam-Chr4:22063855 4.40E-45 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0773 K00799 - csv:101215228 369.777