Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0776 ATGGCAGAAAACTTGGAGGTGTTTGGTTTCTGGCCAAGTCCATTTAGTCTGAGAGTGGAGTTGGCTCTCAAACTCAAAGGCATCCAATACCAATACTTTGAGGAAGATGTGCTGAACAATAAGAGCGATTTGCTGCTGAAATACAACCCAACCTACAAGAAGATTCCTGTTTTAGTCCACCATGGAAAATCCATTTCAGAGTCTCTTGTAATTCTCGAATACATTGAAGAAAACTGGAAACACAGCCCTATCTTGCCTCATAATCCTCATCAAAGAGCTCTTGCTAGGTTTTGGGCTAAGTATATCGATGGCAAGGTTGTGTCTACGATAGGGAAAGCTCCTGGAAGCAAAGGAGAAGAGATAGAGAAGGCTGTAGAAGAAGTGAAGGAGGCATTGGAACCACTTGAGAAAGAGCTTAAAAGCAACAAGTTTTTTGGGGGAGAAACAATTGGGTTTGTGGACATTGTAGGTATCCTCATAGCCTTTTGGTTTCCTGCCATTGAAGAAGCATTAGGGATTGAGCTGCTAACAACCCACAAATTTCCAAACCTAATACAATGGACTCAAGAGCTTGCCAACCACACTGTGGTGAAGGAGCTTCTCCCTAAAAAGGATAAGCTTGTTGCCCATTTGAAAACTGTTCATGGGAAAAACTAG 657 42.31 MAENLEVFGFWPSPFSLRVELALKLKGIQYQYFEEDVLNNKSDLLLKYNPTYKKIPVLVHHGKSISESLVILEYIEENWKHSPILPHNPHQRALARFWAKYIDGKVVSTIGKAPGSKGEEIEKAVEEVKEALEPLEKELKSNKFFGGETIGFVDIVGILIAFWFPAIEEALGIELLTTHKFPNLIQWTQELANHTVVKELLPKKDKLVAHLKTVHGKN 218
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22073507 22075585 - CaPI482276_04g007760.1 Cam04g0776 124854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0776 218 SFLD Main (cytGST) 2 215 - -
Cam04g0776 218 CDD GST_N_Tau 5 79 - -
Cam04g0776 218 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cam04g0776 218 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam04g0776 218 Gene3D Glutaredoxin 1 84 - -
Cam04g0776 218 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Cam04g0776 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 212 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cam04g0776 218 Coils Coil 118 138 - -
Cam04g0776 218 FunFam Tau class glutathione S-transferase 85 218 - -
Cam04g0776 218 FunFam Tau class glutathione S-transferase 1 87 - -
Cam04g0776 218 Gene3D - 85 218 - -
Cam04g0776 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Cam04g0776 218 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Cam04g0776 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 211 IPR010987 -
Cam04g0776 218 Pfam Glutathione S-transferase, C-terminal domain 108 193 IPR004046 -
Cam04g0776 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0761 Cam-Chr4:21989190 Cam04g0776 Cam-Chr4:22073507 6.80E-83 dispersed
Cam04g0773 Cam-Chr4:22058581 Cam04g0776 Cam-Chr4:22073507 2.20E-81 dispersed
Cam04g0774 Cam-Chr4:22063855 Cam04g0776 Cam-Chr4:22073507 2.40E-48 dispersed
Cam04g0776 Cam-Chr4:22073507 Cam05g0289 Cam-Chr5:2752916 9.20E-56 dispersed
Cam04g0775 Cam-Chr4:22068479 Cam04g0776 Cam-Chr4:22073507 5.50E-49 tandem
Cam04g0776 Cam-Chr4:22073507 Cam04g0777 Cam-Chr4:22079882 8.80E-67 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0776 K00799 - csv:105434443 346.28