Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0777 ATGATGGAACAACTGCAGGTGTTTGGTTGTAGGTTAAGTCCGTTCAGTCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGGCATAAAATACCAATATGTGGAGGAAGACATACCCAACAAAAGCCATTTGCTTCAGAAATACAATCCACTTTACAAGAAGGTCCCTGTGCTCGTCCATAATGGAAACCCCATTGCTGAGTCTCTTGTCATCCTTGAATACATTGATGAGCATTGGAAAACCAATCCCATCTTGCCCCAGCATCCTCGGGAAAGAGCTCAAGCAAGATTTTGGGCCAAGTATATTGATGACAAGTTTTTTGGTGCGTGGAGGAAAGCTGTTAGAAGTCAAAGAGAAGGGAGAGAGAAGGTTGTGAAGGCTGTGGAGGAAGCATGCAAGGCGTTGGAAGCAGTTGAGAATGAGCTTAAAAGCAACAATAAGTTCTTTGGAGGAGACAACATTGGGTTAGTGGACATTGTAGGCATCTTCATAGGCTATTGGGTTCCTATCATGCAAACAGCTCTTGGGTTTGAGATTCTGAGCAGCCACAGGTTCCCAAAACTAAGTAAATGGAGTGAAGATCTTACGAGCCATAGTGTTGTGAAGGAGATTCTCCCTCCAAAACCTGACCTTTTTGCTTATACTCAAACTCGTCTTCTATCCAAAAATCTGGGTTCTAAGCTGTGA 684 43.86 MMEQLQVFGCRLSPFSRRVELALKLKGIKYQYVEEDIPNKSHLLQKYNPLYKKVPVLVHNGNPIAESLVILEYIDEHWKTNPILPQHPRERAQARFWAKYIDDKFFGAWRKAVRSQREGREKVVKAVEEACKALEAVENELKSNNKFFGGDNIGLVDIVGIFIGYWVPIMQTALGFEILSSHRFPKLSKWSEDLTSHSVVKEILPPKPDLFAYTQTRLLSKNLGSKL 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22079882 22081835 - CaPI482276_04g007770.1 Cam04g0777 124855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0777 227 SFLD Main (cytGST) 1 217 - -
Cam04g0777 227 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cam04g0777 227 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cam04g0777 227 SFLD Main.3: Omega- and Tau-like 1 217 IPR045073 -
Cam04g0777 227 FunFam Tau class glutathione S-transferase 84 222 - -
Cam04g0777 227 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 216 IPR010987 -
Cam04g0777 227 FunFam Tau class glutathione S-transferase 1 86 - -
Cam04g0777 227 Coils Coil 120 144 - -
Cam04g0777 227 Pfam Glutathione S-transferase, C-terminal domain 114 195 IPR004046 -
Cam04g0777 227 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cam04g0777 227 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Cam04g0777 227 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cam04g0777 227 Gene3D Glutaredoxin 1 83 - -
Cam04g0777 227 CDD GST_N_Tau 5 78 - -
Cam04g0777 227 CDD GST_C_Tau 88 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam04g0777 227 Gene3D - 84 222 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0775 Cam-Chr4:22068479 Cam04g0777 Cam-Chr4:22079882 4.30E-33 dispersed
Cam04g0777 Cam-Chr4:22079882 Cam05g0289 Cam-Chr5:2752916 1.60E-50 dispersed
Cam04g0776 Cam-Chr4:22073507 Cam04g0777 Cam-Chr4:22079882 8.80E-67 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0777 K00799 - csv:105435246 262.692