Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g0808 | ATGGCACCAACTCAATTCCAGCAACAGAATGGTTCAATGGAGAGCTTGTGCACTAGCCAAAACGATCCACTCAACTGGGGTGTGGCCGCCGAGTCCCTCAAGGGAAGCCATCTCGATGAGGTGAAGCGCATGGTTGAGGAGTACCGGAGGCCCCTAGTCAAGCTTGGTGGTGAAACTCTCACTATTTCCCAAGTAGCTGCTATTGCTACTCGGGACTCTGATGTTACGGTTGAACTTTCTGAGTCTGCTAGAGCTGGTGTTAACGCTAGTAGTGATTGGGTTATGGAGAGTATGAACAAAGGGACTGATAGTTATGGTGTTACTACTGGGTTTGGTGCTACGTCTCATAGAAGGACCAAACAAGGAGGTGCTCTTCAGAAGGAGTTGATTAGATTTTTGAACGCTGGGATTTTTGGAAATGGAGCTGAGTCTGATCATACTTTGCCCCACTCAGCGACAAGGGCGGCCATGTTGGTGAGAATCAATACTCTTCTTCAAGGCTACTCGGGTATTAGATTTGAAATTTTGGAAGCTATAACCAAACTTTTGAACCATAACATTACTCCATGCTTGCCTCTTCGTGGAACAATTACTGCTTCTGGAGATCTTGTTCCACTTTCTTATATTGCTGGATTGCTCACTGGACGACCTAACTCCAAGGCGATTGGACCCAACGGAGAACATATTGACGCCAAGGAGGCTTTCCAACAAGCTGGTATTCCTTCTGGGTTCTTTGAATTGCAACCTAAGGAAGGCCTTGCTCTTGTTAATGGTACTGCTGTCGGATCAGGATTGGCTTCTATTGTCCTCTTTGAGGCAAATATTTTGGTTGTTCTGGCAGAAATTCTTTCTGCTATTTTTTCTGAGGTCATGCAAGGAAAGCCAGAATTTACTGATCATTTGACTCATAAGTTGAAGCACCATCCTGGTCAAATTGAAGCAGCTGCAATTATGGAGCACATTTTGGATGGAAGCTCTTACATGAAAGCAGCCAAGAAATTGCATGAAATTGATCCCCTCCAAAAGCCTAAACAAGATCGCTATGCTCTAAGAACTTCACCTCAATGGCTTGGTCCCTTGATTGAAGTGATTCGATTCTCTACAAAATCTATTGAGCGAGAGATTAACTCCGTCAATGACAACCCTTTGATTGACGTTTCAAGAAACAAAGCACTACATGGAGGCAACTTTCAAGGAACACCAATTGGAGTTTCCATGGACAACACTCGATTGGCCATTGCTTCTATTGGGAAGCTCATGTTTGCCCAATTCTCAGAACTTGTTAATGATTTCTACAACAACGGTTTGCCATCTAATCTTTCTGCAAGTAGAAATCCGAGTTTGGATTATGGGTTTAAAGGAGCTGAAATTGCCATGGCTTCATACTGTTCTGAGCTTCAATACCTTGCAAATCCAGTGACAAGCCATGTTCAAAGCGCCGAGCAACACAACCAAGATGTTAACTCTCTAGGTTTAATTTCTTCAAGGAAAACAGCTGAAGCCATTGATATTCTGAAACTCATGTCATCTACATTTTTGGTTGCTCTCTGCCAAGCAATTGACTTAAGGCATTTGGAGGAAAACTTGAAGAGCACTGTGAAAAGCACTGTTAGCCAAATAGCCAAGAAAGTATTGACCACATCCTCTAATGGCACACTTCACCCCTCAAGATTTTGTGAGAAAGATCTACTCAAAGTCATTGATAGAGAGTACACATTTGCTTATATCGACGATCCATGTAGTGCTACTTACCCATTAAGCCAAAAGTTGAGGCAAGTTCTTGTTGAGCATGCACTTGCAAACGGTGATGATGAAAAGAACCCAAACACTTCAATCTTCCAAAAGATTGTTTCTTTCGAGGAGGAACTAAAGGCAATATTACCCAAGGAAGTTGAAAATGCAAGGTTGGCCTATGAGAGTGGAGATTCTAAAATTGAAAATCAGATCAAGGATTGTAGATCATATCCGTTGTATAGATTTGTAAGAGAAGAGTTGGAAACAAAAATGCTAACAGGAGAAAGAGTGATATCTCCGGGAGAAGAGTGTGAGAAAGTATTCACAGCTTTGTGTCAAGGCAAGATGATAGACTCGATCTTAGAGTGCTTGAAGGAGTGGAATGGTGCTCCAATTCCTATTTGCTAA | 2142 | 42.44 | MAPTQFQQQNGSMESLCTSQNDPLNWGVAAESLKGSHLDEVKRMVEEYRRPLVKLGGETLTISQVAAIATRDSDVTVELSESARAGVNASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQKELIRFLNAGIFGNGAESDHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAIGPNGEHIDAKEAFQQAGIPSGFFELQPKEGLALVNGTAVGSGLASIVLFEANILVVLAEILSAIFSEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTAEAIDILKLMSSTFLVALCQAIDLRHLEENLKSTVKSTVSQIAKKVLTTSSNGTLHPSRFCEKDLLKVIDREYTFAYIDDPCSATYPLSQKLRQVLVEHALANGDDEKNPNTSIFQKIVSFEEELKAILPKEVENARLAYESGDSKIENQIKDCRSYPLYRFVREELETKMLTGERVISPGEECEKVFTALCQGKMIDSILECLKEWNGAPIPIC | 713 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22371298 | 22373439 | + | CaPI482276_04g008080.1 | Cam04g0808 | 124886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g0808 | 713 | FunFam | Phenylalanine ammonia-lyase | 526 | 647 | - | - | |
Cam04g0808 | 713 | CDD | PAL-HAL | 58 | 523 | IPR001106 | - | |
Cam04g0808 | 713 | PANTHER | HISTIDINE AMMONIA-LYASE | 18 | 713 | IPR001106 | GO:0016841(PANTHER)|GO:0045548(PANTHER) | |
Cam04g0808 | 713 | Pfam | Aromatic amino acid lyase | 60 | 536 | IPR001106 | - | |
Cam04g0808 | 713 | Gene3D | - | 14 | 259 | IPR024083 | - | |
Cam04g0808 | 713 | Gene3D | - | 526 | 647 | IPR023144 | - | |
Cam04g0808 | 713 | FunFam | Phenylalanine ammonia-lyase | 13 | 259 | - | - | |
Cam04g0808 | 713 | ProSitePatterns | Phenylalanine and histidine ammonia-lyases signature. | 195 | 211 | IPR022313 | GO:0016841(InterPro) | |
Cam04g0808 | 713 | NCBIfam | phenylalanine ammonia-lyase | 22 | 703 | IPR005922 | GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro) | |
Cam04g0808 | 713 | SUPERFAMILY | L-aspartase-like | 22 | 713 | IPR008948 | GO:0003824(InterPro) | |
Cam04g0808 | 713 | Gene3D | Fumarase/aspartase (Central domain) | 260 | 708 | - | - | |
Cam04g0808 | 713 | FunFam | Phenylalanine ammonia-lyase | 260 | 561 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam04g0805 | Cam-Chr4:22357412 | Cam04g0808 | Cam-Chr4:22371298 | 0.00E+00 | dispersed | |
Cam04g0808 | Cam-Chr4:22371298 | Cam07g1372 | Cam-Chr7:28107830 | 0.00E+00 | dispersed | |
Cam04g0807 | Cam-Chr4:22366293 | Cam04g0808 | Cam-Chr4:22371298 | 0.00E+00 | tandem | |
Cam04g0808 | Cam-Chr4:22371298 | Cam04g0809 | Cam-Chr4:22376029 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g0808 | K10775 | - | csv:101218617 | 1342.02 |