Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0811 ATGGCGGAATCCGGTCACCAAAATGGCTTCGAGTTTTGCATCGGCGGCCGGAACAATATCAACCATGATCCGTTGAATTGGGGAGTGGCAGCGGAGTCGTTGAAGGGAAGCCATTTGGAAGAAGTGAAGCGGATGGTGGAAGAATACCGGCGGCCGGTGGTGAAGCTGGGAGGAGAGACGCTGACGATATCTCAGGTCGCAGCGATCGCCGCCAAGGATTCCGGCGTGGCGGTGGAGCTGTCGGAGTCGGCGAGAGGCGGCGTTGAGGCCAGCAGTAAGTGGGTGATGGACAGCATGAATCAAGGGACTGATAGCTACGGCGTCACCACCGGCTTCGGCGCCACCTCCCACCGCCGGACTAAAGAAGGTGGCGCTCTGCAGAGGGAGCTCATACGATTTTTGAATTCGGGAATATTTGGAAATGGTATTGAATCAAGTCACACTTTGCCTCACTCAGCAACGAGAGCAGCCATGTTGGTTAGAATTAACACTCTCCTTCAAGGCTACTCGGGCATTAGGTTTGAAATTTTGGAAGCCATAACCAAACTTCTCAACCACAACATCACCCCATGTTTGCCACTTCGAGGAACCATTACTGCTTCTGGAGATCTTGTTCCTCTTTCTTACATTGCTGGATTGCTTACTGGCCGACTGAACTCTAAAGCTATTGGTCCAAATGGAGAAAGTCTTGATGCGAAGGAGGCTTTCAAACAAGCTGGTATTGCGTCTGGGTTCTTTGAGTTGCAACCTAAGGAAGGGTTGGCTCTCGTCAATGGGACTGCTGTTGGTTCGGGGTTAGCATCTATTGTTCTTTTTGAGGCAAACATTTTGGCAGTTTTAGCTGAGATTTTGTCGGCTATTTTTGCTGAGGTTATGCAAGGAAAGCCTGAATTTACAGATCATTTGACACACAAGTTAAAGCATCATCCTGGTCAGATTGAGGCAGCTGCAATCATGGAACACATTTTGGATGGAAGTTCTTACGTTAAAGAAGCTAAAAAATTGCATGAAATTGATCCTCTTCAGAAGCCGAAACAAGATCGCTACGCTCTTAGAACGTCACCTCAATGGCTTGGTCCATTGATTGAGGTCATTAGATTTTCTACCAAGTCAATTGAGCGAGAGATTAATTCAGTTAATGATAATCCTTTGATTGACGTTTCAAGGAACAAGGCTTTACATGGAGGTAACTTCCAGGGAACGCCAATTGGTGTCTCGATGGACAACACTCGCTTGGCTATAGCTTCGATTGGTAAGCTCATTTTCGCTCAATTTTCTGAGCTTGTTAATGATTTCTACAACAATGGTTTACCTTCAAATCTCTCTGCCAGTAGAAACCCAAGTTTAGATTATGGATTCAAAGGTACCGAAATTGCTATGGCTTCCTATTGCTCTGAGCTTCAATATTTAGCCAACCCAGTAACAAGCCATGTCCAAAGTGCTGAGCAACATAATCAAGATGTTAACTCTCTTGGTTTAATCTCCTCGAGAAAAACAGAAGAAGCCATTGACATTTTGAAACTCATGTGTTCAACATTTTTAGTTGCACTTTGCCAAGCAATTGACTTGAGGCATTTGGAAGAAAATTTAAAGAGCACAGTGAAAAACACAATAAGCCAAGTGGCCAAGAAGGTCCTTACCACCGATGCTAATGGAGCTCTCCACCCATCAAGATTTTGTGAGAAGGATTTACTCAAAATTGTTGATAGAGAATACACCTTTGCTTACATTGATGACCCATGCAGTGCCACTTATCCGTTAATGCAGAAGTTAAGACAAGTTCTTGTAGAACATGCACTTGCAAATGGAGAAGATGAGAAGAACCCAAATAGTTCAATCTTTCAAAAGATTGGTGTTTTTGAAGAGGAACTAAAAGCTGTTTTGCTCAAGGAGGTAGAAAGTGCAAGGTTTGCTTATGAAAATGGGAACTTTACCATTCAAAATCAAATTAAGGAATGTCGGTCATATCCACTCTACAAGTTTGTGAGAACTGAGTTAGGAACTGAGTTACTTACAGGAGAGAAGGTAAAATCTCCGGGAGAAGTGTGCGAGAAAGTGTTTATTGCTTTATGTCAAGGAAAGATGATTGACCCAATTTTAGAGTGTTTAAAAGAGTGGAATGGTGCTCCAATCCCTATTTGCTAA 2145 43.73 MAESGHQNGFEFCIGGRNNINHDPLNWGVAAESLKGSHLEEVKRMVEEYRRPVVKLGGETLTISQVAAIAAKDSGVAVELSESARGGVEASSKWVMDSMNQGTDSYGVTTGFGATSHRRTKEGGALQRELIRFLNSGIFGNGIESSHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKLLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRLNSKAIGPNGESLDAKEAFKQAGIASGFFELQPKEGLALVNGTAVGSGLASIVLFEANILAVLAEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKEAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLIFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGTEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTEEAIDILKLMCSTFLVALCQAIDLRHLEENLKSTVKNTISQVAKKVLTTDANGALHPSRFCEKDLLKIVDREYTFAYIDDPCSATYPLMQKLRQVLVEHALANGEDEKNPNSSIFQKIGVFEEELKAVLLKEVESARFAYENGNFTIQNQIKECRSYPLYKFVRTELGTELLTGEKVKSPGEVCEKVFIALCQGKMIDPILECLKEWNGAPIPIC 714
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22391570 22394597 - CaPI482276_04g008110.1 Cam04g0811 124889
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0811 714 FunFam Phenylalanine ammonia-lyase 261 568 - -
Cam04g0811 714 PANTHER HISTIDINE AMMONIA-LYASE 20 714 IPR001106 GO:0016841(PANTHER)|GO:0045548(PANTHER)
Cam04g0811 714 Gene3D - 527 648 IPR023144 -
Cam04g0811 714 Pfam Aromatic amino acid lyase 61 539 IPR001106 -
Cam04g0811 714 FunFam Phenylalanine ammonia-lyase 527 648 - -
Cam04g0811 714 SUPERFAMILY L-aspartase-like 23 714 IPR008948 GO:0003824(InterPro)
Cam04g0811 714 Gene3D - 14 260 IPR024083 -
Cam04g0811 714 NCBIfam phenylalanine ammonia-lyase 23 704 IPR005922 GO:0005737(InterPro)|GO:0006559(InterPro)|GO:0016841(InterPro)
Cam04g0811 714 Gene3D Fumarase/aspartase (Central domain) 261 709 - -
Cam04g0811 714 CDD PAL-HAL 59 524 IPR001106 -
Cam04g0811 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841(InterPro)
Cam04g0811 714 FunFam Phenylalanine ammonia-lyase 16 260 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0811 Cam-Chr4:22391570 Cam07g1372 Cam-Chr7:28107830 0.00E+00 dispersed
Cam04g0810 Cam-Chr4:22383130 Cam04g0811 Cam-Chr4:22391570 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0811 K10775 - csv:101217907 1339.32