Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g0825 | ATGTCGAAGGATATTGAAGCTGGAGGGCGTGGTGGGTTTAGTGGGAAGGATTACGAAGATCCGCCGCCGGCCCCATTGATCGACGCTCAGGAGTTTGCCCAGTGGTCATTTTATAGAGCCATTATAGCAGAGTTTGTTGCTACTCTTTTGTTCTTGTATGTTACTGTTCTTACTGTCATTGGGTATAAAGTTCAGAGTGATGATAAGAATGGAGGCGAGATTTGTGGTGGCGTCGGTATTTTGGGCATTGCTTGGGCCTTTGGTGGCATGATTTTTGTTCTTGTTTACTGCACCGCCGGGATTTCTGGAGGACATATTAATCCAGCGGTGACTTTTGGGTTGTTCTTGGCTCGGAAAGTGTCTTTAATTCGAGCAATCCTTTACATGGTGGCTCAATGTTTAGGCGCCATTTGTGGGTGTGCATTGGTGAAATCATTCCAGAAGGCTCATTACAATGAGTACGGCGGTGGAGCCAATTCTCTCGCCGATGGGTACAGCACGGGCACCGGCTTAGCGGCGGAGATCATCGGAACTTTCGTTCTTGTTTACACCGTCTTCTCCGCCACCGACCCGAAGAGAAACGCTAGAGATTCTCACGTTCCAGTTTTGGCTCCACTCCCAATTGGATTCGCAGTGTTTATGGTTCATTTGGCTACCATTCCGATCACCGGCACCGGCATCAACCCAGCTCGAAGCTTTGGAGCTGCCGTGATCTTTAACAAAGACAAGCCCTGGGATGATCAGTGGATCTTTTGGGTTGGGCCGTTCATTGGAGCTGCCATTGCTGCAATTTATCATCAAATCGTGTTGAGGGCAGGGGCAGTTAAAGCTCTGGGATCGTTCAGAAGTTCCACTGCCGTATGA | 864 | 49.07 | MSKDIEAGGRGGFSGKDYEDPPPAPLIDAQEFAQWSFYRAIIAEFVATLLFLYVTVLTVIGYKVQSDDKNGGEICGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAILYMVAQCLGAICGCALVKSFQKAHYNEYGGGANSLADGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNKDKPWDDQWIFWVGPFIGAAIAAIYHQIVLRAGAVKALGSFRSSTAV | 287 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 22513641 | 22520189 | - | CaPI482276_04g008250.1 | Cam04g0825 | 124903 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g0825 | 287 | Gene3D | Glycerol uptake facilitator protein. | 24 | 287 | IPR023271 | - | |
Cam04g0825 | 287 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Cam04g0825 | 287 | SUPERFAMILY | Aquaporin-like | 31 | 271 | IPR023271 | - | |
Cam04g0825 | 287 | FunFam | Probable aquaporin PIP1-2 | 24 | 285 | - | - | |
Cam04g0825 | 287 | PRINTS | Major intrinsic protein family signature | 87 | 111 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | PRINTS | Major intrinsic protein family signature | 209 | 231 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | PRINTS | Major intrinsic protein family signature | 249 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | PRINTS | Major intrinsic protein family signature | 39 | 58 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | PRINTS | Major intrinsic protein family signature | 173 | 191 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | PRINTS | Major intrinsic protein family signature | 124 | 143 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 3 | 283 | IPR034294 | GO:0005886(PANTHER)|GO:0015250(PANTHER) | |
Cam04g0825 | 287 | CDD | MIP | 39 | 269 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | Pfam | Major intrinsic protein | 32 | 266 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | NCBIfam | MIP family channel protein | 43 | 265 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0825 | 287 | ProSitePatterns | MIP family signature. | 105 | 113 | IPR022357 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g2184 | Cam-Chr2:34570844 | Cam04g0825 | Cam-Chr4:22513641 | 5.80E-135 | dispersed | |
Cam04g0519 | Cam-Chr4:18586301 | Cam04g0825 | Cam-Chr4:22513641 | 6.40E-12 | dispersed | |
Cam04g0825 | Cam-Chr4:22513641 | Cam05g2298 | Cam-Chr5:31095131 | 4.20E-133 | dispersed | |
Cam04g0824 | Cam-Chr4:22508411 | Cam04g0825 | Cam-Chr4:22513641 | 1.90E-122 | tandem | |
Cam04g0825 | Cam-Chr4:22513641 | Cam04g0826 | Cam-Chr4:22529881 | 6.20E-145 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g0825 | K09872 | - | csv:101215366 | 526.168 |