Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0829 ATGGCAGGAGGACATATAAACCCAGCAGTGACATTTGGGCTGTTTTTGGGTCGGAAGGTTTCATTGGTTAGAGCTGCACTATACATAATGGCTCAGTGTTTGGGAGCCATTTGTGGGTGTGGGTTGGTGAAGTCGTTAAAGAAGGCTAACTTCAATGCCTTCAGCGGTGGAGCCACCGAGCTCGCCGACGGCTTTAGCCCCGGTGCTGGCCTCGCCGCTGAGATCATCGGAACCTTCGTTCTTGTATACACTGTCTTCTCTGCCACCGATCCCAAAAGAAAAGCTAGAGATTCCCATGTTCCTGTTCTAGCGCCGCTCCCAATTGGGTTCGCCGTGTTCGTGGTGAATTTAGCCACGATTCCGGTCACCGGCGCCGGCATTAACCCAGCTCGAAGCTTCGGCTCTGCAGTGATGTTCAACAACCACAAAGCTTGGGATAACCATTGGATATTTTGGGTTGGACCTTTCATTGGAGCTGCAATGGCTGCAATTTACCATGAATTTGTTTTGAGAGGAGGAGCAGCTAAGACCTTGAAATCCTTCAGAACTTCCTCAATTTAA 561 49.91 MAGGHINPAVTFGLFLGRKVSLVRAALYIMAQCLGAICGCGLVKSLKKANFNAFSGGATELADGFSPGAGLAAEIIGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGFAVFVVNLATIPVTGAGINPARSFGSAVMFNNHKAWDNHWIFWVGPFIGAAMAAIYHEFVLRGGAAKTLKSFRTSSI 186
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22543175 22544853 + CaPI482276_04g008290.1 Cam04g0829 124907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0829 186 Gene3D Glycerol uptake facilitator protein. 1 186 IPR023271 -
Cam04g0829 186 PRINTS Major intrinsic protein family signature 73 91 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam04g0829 186 PRINTS Major intrinsic protein family signature 24 43 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam04g0829 186 PRINTS Major intrinsic protein family signature 149 169 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam04g0829 186 PRINTS Major intrinsic protein family signature 109 131 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cam04g0829 186 ProSitePatterns MIP family signature. 5 13 IPR022357 -
Cam04g0829 186 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 2 182 IPR034294 GO:0005886(PANTHER)|GO:0015250(PANTHER)
Cam04g0829 186 SUPERFAMILY Aquaporin-like 2 171 IPR023271 -
Cam04g0829 186 Pfam Major intrinsic protein 2 166 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0829 Cam-Chr4:22543175 Cam08g1194 Cam-Chr8:18281454 7.80E-80 dispersed
Cam04g0826 Cam-Chr4:22529881 Cam04g0829 Cam-Chr4:22543175 3.10E-80 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0829 K09872 - csv:101215842 367.466