Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0831 ATGAAGTTTCGTGGTCTTCTTTCTAATTGTTGTTACTCTCCATCGCCGACTGCCATGGAAAATAGCCGCCACGATAGACAAGACAATGAGAGTTTTCGTGTGTACTCTTATAACGAGCTTAAATCGGCCACCAATGGATTTAGTGGAGCGAATAAGGTTGGAGAGGGTGGATTCGGCATTGTTTACAAGGGTCGGCTTCGAGATGGCAGGAAGATTGCTGTGAAGGTGCTTTCTATTGAGGTAGAATCCATGAGAGGAGAAAGGGAGTTCATAGCTGAGTTAACTTCACTTTCTAACATTAGACATGAAAATCTGGTTGAGCTTAAAGGGTGTTATGTTGATGGAAGTAACAGATATTTGGTCTATGATTACATGGAAAACAACAGCCTTGCACATGCTCTTCAGGGTGTGAGGGAAAATAGAATGAGACTTAGTTGGCTAGCCAGAAAGGAAATTTTAATTGGAGTTGCTCGTGGGCTTGCCTATCTTCATGAGGAGGTTGAGCCGCATATAGTTCATAGAGATATAAAATCCAGCAATATACTACTCGACCATAATTTTACACCTAAAGTTGCGGATTTTGGATTGGCTAAGTTGTTGAGAGAGAACCATTCTCATGTTAGTACTCGTGTTGCTGGCACAATAGGATATCTTGCTCCAGAATATGCTGTGAGCGGCCATTTGACGCGAAAATCGGATGTCTATAGCTTCGGAGTGTTGTTGTTGGAGATTGTCAGTGGAAGAGCAACTGTTGATTTTGATTTGGAACATGGCGAGCACCATTTGGTTCAAAAGGTATGGGAACATTACAAGAGGAACGAGCTAGTAAAATTGATAGATCCCATGCTTGACATAGACTTCCGCGAAGAAGAAGCTGTTCGGTTTATGAAGATTGGTCTACTCTGTGTGCAAGAAAACACAACGAAACGACCACGAATGTCTCTTGCTTTAAGCATGTTGATGAAAGAAACCAACGTTAATGATCATAATATTTCACAACCTGGACATATTATTGACTTCATGGACATTAAAATGGGTAAAGGAAACTCGTCAACCAGCATTTTCTCCAAGGTTTCCACAGGAAATAGCTTATTAAGTCCTACAAAGGTAAGAGATGAATCAGATGATGTACTTACTTGGAAAAGAAAACTGAGGCAAGGCAATGTTCTTAAGCTTAATGTGGTTTCTTTGCGTATGCAAATTTATATATGCATAGCTCCTTGCATGCCATTTAAGAAGGCCACCTATTCTCGGATGATGGGCTTTGCAAATGGCATACAGGGAGCCAGGCATACAATGCTACATACTTTTGCAATTGAACCAAAAGAAGAAAGAAAGAGTGAAAAATGA 1350 40.67 MKFRGLLSNCCYSPSPTAMENSRHDRQDNESFRVYSYNELKSATNGFSGANKVGEGGFGIVYKGRLRDGRKIAVKVLSIEVESMRGEREFIAELTSLSNIRHENLVELKGCYVDGSNRYLVYDYMENNSLAHALQGVRENRMRLSWLARKEILIGVARGLAYLHEEVEPHIVHRDIKSSNILLDHNFTPKVADFGLAKLLRENHSHVSTRVAGTIGYLAPEYAVSGHLTRKSDVYSFGVLLLEIVSGRATVDFDLEHGEHHLVQKVWEHYKRNELVKLIDPMLDIDFREEEAVRFMKIGLLCVQENTTKRPRMSLALSMLMKETNVNDHNISQPGHIIDFMDIKMGKGNSSTSIFSKVSTGNSLLSPTKVRDESDDVLTWKRKLRQGNVLKLNVVSLRMQIYICIAPCMPFKKATYSRMMGFANGIQGARHTMLHTFAIEPKEERKSEK 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22561098 22563348 - CaPI482276_04g008310.1 Cam04g0831 124909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0831 449 FunFam Putative LRR receptor-like serine/threonine-protein kinase 125 332 - -
Cam04g0831 449 CDD STKc_IRAK 53 322 - -
Cam04g0831 449 SMART serkin_6 47 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0831 449 Gene3D Phosphorylase Kinase; domain 1 17 124 - -
Cam04g0831 449 FunFam Serine/threonine-protein kinase receptor 17 124 - -
Cam04g0831 449 Gene3D Transferase(Phosphotransferase) domain 1 125 337 - -
Cam04g0831 449 ProSiteProfiles Protein kinase domain profile. 47 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0831 449 SUPERFAMILY Protein kinase-like (PK-like) 28 320 IPR011009 -
Cam04g0831 449 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 25 356 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cam04g0831 449 ProSitePatterns Protein kinases ATP-binding region signature. 53 75 IPR017441 GO:0005524(InterPro)
Cam04g0831 449 Pfam Protein kinase domain 51 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0831 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0831 Cam-Chr4:22561098 Cam07g1093 Cam-Chr7:25414110 3.50E-102 dispersed
Cam04g0831 Cam-Chr4:22561098 Cam07g1057 Cam-Chr7:24920524 3.10E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85122 PF00069 Pkinase 1.90E-49 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0831 - - - 0.0