Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0836 ATGTCTCTTGGGAGCTCCAAATTTGTGTTTCTTCTATTATCCTTCCTTTTCCTTTCCAATTTTGGAAAAAGCCAACAACTTATTATGAATTACTACAACCAAACTTGCCCAAAAGCTGAAGATATAATCAAACAAGAAGTTTTTTCTTTATACAAAAAACATGGAAACTCAGCCATTTCATGGATTAGAAATCTCTTCCATGATTGCATGGTCAAGTCATGTGATGCATCTCTTTTATTAGAGATGAAAAAGGAAGAAGGTGTATCAGAAATGAAGTCTTCAAGAAGCTTTGGGATAAGAAATCTCAAATATGTTAATAAAATTAAACAAGTCCTTGAAAATGAATGCCCTAACACTGTTTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCTATTGTTTTGTTGGGGGGATTAGAGATGGAAATGAAAACAGGAAGAAGAGATAGCAAAGAAAGCTATGGAGAAATAGTGGAAGAAATGATTCCAAATCATAATGACTCTCTTTCATTGGTTCTTTCTCGCTTTCAAGATATTGGCATTGATCCTCAAGCTACTGTTGCTCTTTTAGGAGCTCACTCTGTGGGTCGAGTCCATTGTGTAAACATAGTGAACCGTCTCTACCCGACCGTGGACCCGACTTTGGATCCAGATCACGCAGAATATTTAAAAGAAAGGTGCCCAAACCCGAACCCGGATCCGAAGGCAGTCCAATACGCGAGAAATGATTTGGAAACTCCGATGGTGTTGGACAACAATTTCTACAAAAACGTATTGGGGCACAAGGCCCTTTTGTTAGTGGACCAGCAATTGGGCTCAAGCCCAATAACTCTTCCTTATGTCCAACAAATGACCTCCAATAACACTTACTTTCTGGCCCAATTTGCTAGGGCTTTGCTCTTGCTGTCTGAGAACAACCCTCTCACTGATGAAGAAGGAGAGATTAGAAAGGATTGTCGACGTGTCAACAATTGA 978 39.47 MSLGSSKFVFLLLSFLFLSNFGKSQQLIMNYYNQTCPKAEDIIKQEVFSLYKKHGNSAISWIRNLFHDCMVKSCDASLLLEMKKEEGVSEMKSSRSFGIRNLKYVNKIKQVLENECPNTVSCADIMALAARDAIVLLGGLEMEMKTGRRDSKESYGEIVEEMIPNHNDSLSLVLSRFQDIGIDPQATVALLGAHSVGRVHCVNIVNRLYPTVDPTLDPDHAEYLKERCPNPNPDPKAVQYARNDLETPMVLDNNFYKNVLGHKALLLVDQQLGSSPITLPYVQQMTSNNTYFLAQFARALLLLSENNPLTDEEGEIRKDCRRVNN 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22604867 22606822 + CaPI482276_04g008360.1 Cam04g0836 124914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0836 325 Pfam Peroxidase 44 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 Gene3D - 30 324 - -
Cam04g0836 325 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 CDD secretory_peroxidase 26 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cam04g0836 325 PANTHER - 11 324 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 FunFam Peroxidase 164 303 - -
Cam04g0836 325 Gene3D Peroxidase, domain 2 164 303 - -
Cam04g0836 325 SUPERFAMILY Heme-dependent peroxidases 26 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 ProSiteProfiles Plant heme peroxidase family profile. 26 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cam04g0836 325 FunFam Peroxidase 30 172 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam03g0468 Cam-Chr3:5684145 Cam04g0836 Cam-Chr4:22604867 8.90E-103 dispersed
Cam04g0836 Cam-Chr4:22604867 Cam07g0902 Cam-Chr7:22142109 2.40E-52 dispersed
Cam10g2006 Cam-Chr10:33940139 Cam04g0836 Cam-Chr4:22604867 1.70E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0836 K00430 - csv:101221151 565.459