Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0881 ATGAATCCCCAAATTAGCCAATGGTGTGTCTCAGCCAAGCCTTTTTTTGCTGTAGTGTTCTTGCAGTTTGGTCTTGCAGGAATGGACATTCTGTCTAAAGCAGCTCTGAACCAAGGAATGAGCAACTATGTTCTTGTTGTTTATCGCCATGCAGTTGCCACAATTGTTATAGCTCCTTTTGCACTGATTTTTGACAAGAAAGTCAGACCAAAAATGACAATTCCAGTCTTTGCCAAGTTAATGGTCCTCAGCTTGCTAGAGCCTGTGATTGACCAAAACCTATATTTCTTGGGAATGAAGTACACAACAGCAACTTTTGCAGCTGCCATGTGCAATATCCTCCCTGCCATTACCTTTGTAATGGCTTGGATCCTCAGGCTTGAGAAGGTAAGAATCAAAAGCATCAGAAGCCAAGCTAAGATAGTAGGAACCATAGCAACAGTTGGAGGAGCCATGATGATGACACTAATAAAAGGCCCAATTTTGGAGCTATTTTGGGTTAAAGAAAGAGCAAACAATCAACAACAAAGAGGTGAAATCAGCCTTCAACATACAATCAAAGGTTCAATTATGATAACAATTGGCTGCTTCAGTTGGGCCTGTTTCATGATTCTTCAGGCAATCACTTTGAAAGCTTACCCAGCTGAGCTTTCCCTTACGGCTTGGATCTGCCTGCTGGGAACTGCGGAAGGCACTGTTTTGGCTTTGGTAATGGAAAGAGGAAACGCCGCCGTTTGGTCCATTACTTGGGGAACTAAATTGCTCGCCGCTGTCTATAGTGGGATATTTTGTTCAGGACTTGCTTATTACATTCAAGGACTAGTAATGAAAGACAAAGGACCTGTATTTGTGACTGCCTTTAGCCCATTGAGTATGGTCATTGTGGCCATTATGAGTTCCTTCATTTTAGGCGAACGTCTTTACTTTGGAAGGATAGTTGGAGCTGGTGTGATAATTGTGGGACTATACCTTGTTGTTTGGGGGAAAAACAAAGATGGGAATTGTTCCTCAAGTAGTGAAGACTTGAAATTGCCCACACAACAAACAAAAGAAATGGAAGACAACAAGATGGAAAGTTTAACAATTGAAGCAACTAATTCAGTTGATCTAAAGAATAATATTGAGCAAAAATAA 1134 41.09 MNPQISQWCVSAKPFFAVVFLQFGLAGMDILSKAALNQGMSNYVLVVYRHAVATIVIAPFALIFDKKVRPKMTIPVFAKLMVLSLLEPVIDQNLYFLGMKYTTATFAAAMCNILPAITFVMAWILRLEKVRIKSIRSQAKIVGTIATVGGAMMMTLIKGPILELFWVKERANNQQQRGEISLQHTIKGSIMITIGCFSWACFMILQAITLKAYPAELSLTAWICLLGTAEGTVLALVMERGNAAVWSITWGTKLLAAVYSGIFCSGLAYYIQGLVMKDKGPVFVTAFSPLSMVIVAIMSSFILGERLYFGRIVGAGVIIVGLYLVVWGKNKDGNCSSSSEDLKLPTQQTKEMEDNKMESLTIEATNSVDLKNNIEQK 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 22949554 22952808 - CaPI482276_04g008810.1 Cam04g0881 124959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0881 377 Pfam EamA-like transporter family 23 153 IPR000620 GO:0016020(InterPro)
Cam04g0881 377 Pfam EamA-like transporter family 187 326 IPR000620 GO:0016020(InterPro)
Cam04g0881 377 PANTHER WAT1-RELATED PROTEIN 17 341 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cam04g0881 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 331 - -
Cam04g0881 377 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0881 Cam-Chr4:22949554 Cam07g0313 Cam-Chr7:4208202 1.70E-110 dispersed
Cam04g0881 Cam-Chr4:22949554 Cam09g2052 Cam-Chr9:35074539 4.30E-101 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0881 - - - 0.0