Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0908 ATGGGTAATCGTATTGGGAAGATTGGCCACTGTTTCGCCGGCGCCGGCGATATTTCCCGCCGTTATGATCCCGCCGACATTATCTCCGACCCACACGACGGGGGTTTCGGTCATTCCTTTTACTACCTCCCACCCGAACCACATACCTTCTCCTCCTCCAAAGATTTCTCCGACGACTACATCTCTCCGGCGACCATTTTCCGGTCGATTTCCGGCGCCTCTGTGAGTGCCAACGTCTCAACGCCGCTCTCCACTTCTCTTGTCGATCTCTATCCTTACAGCACCACGTTTGATCGGGCCGCAGCTTTCGATTGCTCGAATTCCTTCGCCTCCGTGCCGTTGCAGCCGGTGCCTCGCCAGTCGGTGTCGGGAAATTCCGGCGGATTCCCTTCTTCGGGTCCACTGGAGAGAGGGTTTTTATCTGGACCTTTGGCCGCCAGGACCTTCGAATCGGGTCCGATTGATCGAGTGGTTTATTCCGGTCCGATTGAGAAGGGTGGTGGACCCGAGAAATTGCAAAGGAACGTCTCTCATGGCGGCGTCGGAGACAGAGAACCGAAATCGAAAAGAAGAAGAAGAAGAAGAAGTCTTATTCGGATTCTGAAGAGAGCCATATCCAAAACCATTTCTCGAAACCAGAAGGCAGCGACTAAGAGAGTGAGAGAATCGGAATCGTACAAGCATAATGAAAATGCTGCAGCTTCTGCAGCTCAGACTCAGAGCAGTGTCCATTTGAGCAGCCATGCGAGCTTGGCTCAGGAAGACGACGGCGATTATTTTCTCGGCGGTCAGAGCGTGCAGTGGGCGCAGGGGAAAGCCGGTGAGGATAGAGTTCACGTGGTGATATCGGAGGATAATGGTTGGGTTTTCGTCGGAATTTATGATGGATTCAACGGCCCTGATGCTCCTGATTACTTACTTGCTAATCTCTACACTGCCGTTCTTAAAGAACTCAAGGGTTTGATTTGGAGTGATAAGTTTGATTCGACTGCAACTTCATCTTCCATGAACTCATCCAACTCTGCTTCAATTGAGGAAGACGATCATGGAACAACTCACATGAAAAATCAGGAGAATGATCATCAATCGACAGAGAACTTCTCAGCACAAAATGGGGTTGTGAATTTGGAGGCTGATTCAGTGAGGACAAGAGAGAGAGTTTATAATACGAACTATAGGACGAGTCAGCTGATGAAGAAGGCTGATCAGAATCCAAAGAATTGGAAATGTGAATGGGAAAGGGAAAGATTAGGATTAGAGGGGAAGTTGAACAATAGACAATTAGATCACCACCAAATATGGGATGAATCAACAGCAATCAATCATTCTGAGGTGTTGAATGCTCTGTCTCAAGCTTTGAGAAAAACAGAGGAAGCATATCTGCAGAATGCAGACAAGATGGTCACAAGAAATCCTGAGCTAGCTCTTATGGGTTCTTGTGTTTTGGTTATGTTGATGAGAGGAGAAGATGTCTACTTGATGAATGTAGGAGACAGCCGCGCAATTGTAGCACAGCAATTTGAACCGGATTTCGGGACTGGAAAGCCATACAGAGACTTAGAGAGAATCAACGAAGGAACACTACGAGTATTTGAATCCTCTAATGGAGTAGAGTTTGAAAGATTAAAAGCCTTGGCTTCCCATCAGCTTACGATGGACCACAGCACTTACACAGAGGAGGAAGTTCAGAGGATCAAGAATGCTCATCCTGATGACGCTTCCGCAATTATGAATGACAGGGTAAAAGGTTATTTGAAGATCACGCGGGCGTTCGGAGCTGGCTTTCTGAAACAGCCAAAGTGGAATGATGCATTGCTAGAGATGTTCAGAATAGACTATGTGGGAAATTCACCTTACATCACCTGTGATCCAACTCTGTGCCATTATAAACTCAGCCCAACAGACAGATTCTTGATATTGTCCTCTGATGGACTCTACCAGTACATTACCAATGAAGAAGCTGTTGCTCAAGTAGAGTCCTTCATTGCTTCTTTTCCTGAAGGAGACCCTGCTCAAAATCTAATTGAAGAAGTATTGTTCCGAGCAGCTAAAAAATACGGAATGGACTTCCATGAGCTGCTTGATATCCCACAAGGGGAGCGGCGGAAGTACCACGATGACGTTTCGAGCAAAAACCTATTGTGTCAGGTTTTCTCTCTAAAATATTCTTGGAAATGGAAGTCTTGGCCAGATTGCAAAAGCATCCATCACAGGCTGAGTTGTTCATTTGGTGGGTTCAGCAATGGAAAAAGTAGGGAGACAAAGGTAAGTGCCGCCCGCCAAATGCTGTGGAGAAGGAATAGATTGAACATAATGAGATATAAACTTAATACACCCCTTCACTTTCTCCCCACCCCACCACACATTCCAATATTGGAGAAGGCTCCTGAGAAATTTGGAAGTTCTTGGTCAGTTTCAAGGCTATGGAATTCTACTGTTGAATTCAAAAGGCAATATATGACTGATTTCTATGATGTTGGAGACAGACTCGTCTCCCTTCAACAGGAGCAGAAAGGCAGGGAGAACATCAGATCTTGTATGAAGCTTGTCTATGATGGTGTCTGTTACTATCATAAATCCATGGAAAGGAGGACCAGCACATCTCTTTTGACTTTTGCCACCGATGGATATTGA 2634 46.05 MGNRIGKIGHCFAGAGDISRRYDPADIISDPHDGGFGHSFYYLPPEPHTFSSSKDFSDDYISPATIFRSISGASVSANVSTPLSTSLVDLYPYSTTFDRAAAFDCSNSFASVPLQPVPRQSVSGNSGGFPSSGPLERGFLSGPLAARTFESGPIDRVVYSGPIEKGGGPEKLQRNVSHGGVGDREPKSKRRRRRRSLIRILKRAISKTISRNQKAATKRVRESESYKHNENAAASAAQTQSSVHLSSHASLAQEDDGDYFLGGQSVQWAQGKAGEDRVHVVISEDNGWVFVGIYDGFNGPDAPDYLLANLYTAVLKELKGLIWSDKFDSTATSSSMNSSNSASIEEDDHGTTHMKNQENDHQSTENFSAQNGVVNLEADSVRTRERVYNTNYRTSQLMKKADQNPKNWKCEWERERLGLEGKLNNRQLDHHQIWDESTAINHSEVLNALSQALRKTEEAYLQNADKMVTRNPELALMGSCVLVMLMRGEDVYLMNVGDSRAIVAQQFEPDFGTGKPYRDLERINEGTLRVFESSNGVEFERLKALASHQLTMDHSTYTEEEVQRIKNAHPDDASAIMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGNSPYITCDPTLCHYKLSPTDRFLILSSDGLYQYITNEEAVAQVESFIASFPEGDPAQNLIEEVLFRAAKKYGMDFHELLDIPQGERRKYHDDVSSKNLLCQVFSLKYSWKWKSWPDCKSIHHRLSCSFGGFSNGKSRETKVSAARQMLWRRNRLNIMRYKLNTPLHFLPTPPHIPILEKAPEKFGSSWSVSRLWNSTVEFKRQYMTDFYDVGDRLVSLQQEQKGRENIRSCMKLVYDGVCYYHKSMERRTSTSLLTFATDGY 877
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23194056 23199627 - CaPI482276_04g009080.1 Cam04g0908 124986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0908 877 MobiDBLite consensus disorder prediction 209 248 - -
Cam04g0908 877 FunFam Protein phosphatase 2C 29 412 721 - -
Cam04g0908 877 MobiDBLite consensus disorder prediction 361 375 - -
Cam04g0908 877 CDD PP2Cc 434 689 IPR001932 -
Cam04g0908 877 MobiDBLite consensus disorder prediction 229 248 - -
Cam04g0908 877 MobiDBLite consensus disorder prediction 330 345 - -
Cam04g0908 877 MobiDBLite consensus disorder prediction 160 195 - -
Cam04g0908 877 SUPERFAMILY PP2C-like 271 708 IPR036457 -
Cam04g0908 877 Pfam Protein phosphatase 2C 425 686 IPR001932 -
Cam04g0908 877 SMART PP2C_4 249 713 IPR001932 -
Cam04g0908 877 MobiDBLite consensus disorder prediction 330 375 - -
Cam04g0908 877 MobiDBLite consensus disorder prediction 346 360 - -
Cam04g0908 877 Gene3D - 228 711 IPR036457 -
Cam04g0908 877 ProSiteProfiles PPM-type phosphatase domain profile. 260 720 IPR001932 -
Cam04g0908 877 PANTHER PROTEIN PHOSPHATASE 2C 240 679 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0908 Cam-Chr4:23194056 Cam10g0180 Cam-Chr10:3391304 2.00E-117 dispersed
Cam05g0706 Cam-Chr5:6202528 Cam04g0908 Cam-Chr4:23194056 1.50E-62 transposed
Cam02g2088 Cam-Chr2:33749551 Cam04g0908 Cam-Chr4:23194056 1.90E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0908 - - - 0.0