Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0926 ATGGCTTCTTCTTTTTTGTTCATCAAAATTTTCTTAACTCTAATTTTTCTCTCCACCCAAACCCTATCTTCACAGTATACCCAACTGTTCTATCCTGGCTTCAATGGATCCATCAACATATCTTTGAAAGAATCTGCCGAAATTGAAAACAATGGAGTTTTGAGGCTAACGAGCAATTCCCAAAACATCATCGGCCAGGCATTTTACGCCTCTCCAATTCAGTTCAAAAACTCCTCCTTCTCCACCTGTTTTGCCTTCTGCATCATCCCCGAGAACGACGGCGGCCATGGCTTCACTTTTTCCATTGTCCCTTCTGAAGATCTCAGAGCTATTCCTCAGAGGTTTCTTGGACTCTTCAACGAAACGAACTTCTACGGCAAATCCTCAAACCATATCTTCGCTGTCGAATTTGATACTATCTACGATGTTGGGATCAAAGATCTTGATAACGATCATGTGGGGATCGATTTAAACAGCTTGATTTCGAATATCTCTGTTCACGCTGCATATTTTGACGATTTGGGTAAAGTTCATAATCTCTCACTCCAAAGTGGGAAGCCAATTAAAGTTTGGATTGATTATGATTCTGATGAAATCACTCTCCATGTTACGATTTCCCCACATTCTTCAAAACCCAGAAGTCCAATTCTGTCGTACAGAGTGGATCTTTCGTCAGTTTTGAATGAAGAAATGTACATTGGGTTTACTGCATCAACAGGCTTACTTTCTAGAAGCTCGCAGTACATTCTGGGGTGGAGTTTCGCCATTAATGGCCGAGCTCGAGATCTTGATCTCTATTCGCTTCCATTACCAAAAAAGAAGAAAACAGGGGAGAAAATCAGTCTTCCTGTTTATGTGTCTATAACAACAGTGAGTATTTTTGTGATCTCTGTTTTCGCTTTAGGTTTTTATCTCGTACGAAAGTACAAGAAATCCGACGAAATCGAGCCGTGGGAGCTTCAAATAGGACCCCATCGATATTCCTACAGTGAACTAAAAAAGGCTACAAGAAATTTCAGCGAGAAGGAGGTTCTTGGGTATGGCGGATCTGGGAAAGTATACAGAGGAATCCTTCCGATTTCGAAAACCCAAATCGCCGTTAAGCGAATTTCTCGCGATTCTAAACAGGGTCTCCGGGAATTCGTGACGGAAATCGCCACAATCGGAATGCTCCGTCATCGAAATCTGGTTCAGTTGCTTGGATGGTGTCGGCGGCAGCAAGATCTGCTTCTGGTTTACGAATTTATGGAGAATGGGAGCTTAGATAATTACCTATTCGATGATCCAAGAACAATTCTGAATTGGGAACAGAGATTCAAAGTAATAAAGGGGGTTGCCTCTGCTTTGCTTTATCTTCACGAGGGGTATAAACAGGTGGTGATTCACAGAGACGTGAAGGCCAGCAATGTGCTATTAGACGACGAATTGAACGGAAGATTGGCGGATTTCGGGCTAGCGAAGGTGTACGAACACGGATCGGCTCCGGATACGACTCGGGTCGTTGGAACTTTGGGGTATTTGGCGCCGGAGTTGTCGAGAACGGGGAAATCGACGACGTGCTCAGACGTATATGCGTTCGGGGCTCTGATGTTGGAAGTGGCTTGTGGGCGGCGGCCGGTGGAGGTGAAGGCGTTGCCGGAGGAGATGACGTTGGTGGATTGGGTTTGGGATAAATACAGAGAAGGGCAGCTTTTGGCCGTCGTGGATCCGAAGCTCCGGGGAGTTTATGACGAAGTTGAGGTGGCGATGGTGTTGAAATTGGGGGTTATGTGTTCGAATAATGAGCCAAAGCAACGGCCGAGTATGAGGCAAGTTGTGCGGTGTTTGGACGGAGAAATTGGTGTCGCCGACGAGTGGAAGGCGCCCAGTGGCGGAAGTAATGGCGGGGCGGTGGGGGATTTTCTTGGGTGTTTAACGTCTACGTCGATTAGTGGAGAAAGCTCATGTTAA 1950 45.64 MASSFLFIKIFLTLIFLSTQTLSSQYTQLFYPGFNGSINISLKESAEIENNGVLRLTSNSQNIIGQAFYASPIQFKNSSFSTCFAFCIIPENDGGHGFTFSIVPSEDLRAIPQRFLGLFNETNFYGKSSNHIFAVEFDTIYDVGIKDLDNDHVGIDLNSLISNISVHAAYFDDLGKVHNLSLQSGKPIKVWIDYDSDEITLHVTISPHSSKPRSPILSYRVDLSSVLNEEMYIGFTASTGLLSRSSQYILGWSFAINGRARDLDLYSLPLPKKKKTGEKISLPVYVSITTVSIFVISVFALGFYLVRKYKKSDEIEPWELQIGPHRYSYSELKKATRNFSEKEVLGYGGSGKVYRGILPISKTQIAVKRISRDSKQGLREFVTEIATIGMLRHRNLVQLLGWCRRQQDLLLVYEFMENGSLDNYLFDDPRTILNWEQRFKVIKGVASALLYLHEGYKQVVIHRDVKASNVLLDDELNGRLADFGLAKVYEHGSAPDTTRVVGTLGYLAPELSRTGKSTTCSDVYAFGALMLEVACGRRPVEVKALPEEMTLVDWVWDKYREGQLLAVVDPKLRGVYDEVEVAMVLKLGVMCSNNEPKQRPSMRQVVRCLDGEIGVADEWKAPSGGSNGGAVGDFLGCLTSTSISGESSC 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23374184 23376133 + CaPI482276_04g009260.1 Cam04g0926 125004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0926 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g0926 649 CDD STKc_IRAK 345 611 - -
Cam04g0926 649 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Cam04g0926 649 FunFam L-type lectin-domain containing receptor kinase V.9 26 259 - -
Cam04g0926 649 Gene3D - 27 265 - -
Cam04g0926 649 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0926 649 Pfam Protein tyrosine and serine/threonine kinase 342 609 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g0926 649 SUPERFAMILY Protein kinase-like (PK-like) 321 607 IPR011009 -
Cam04g0926 649 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524(InterPro)
Cam04g0926 649 CDD lectin_legume_LecRK_Arcelin_ConA 27 258 IPR001220 GO:0030246(InterPro)
Cam04g0926 649 FunFam serine/threonine-protein kinase PBS1-like 306 415 - -
Cam04g0926 649 SMART serkin_6 339 609 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0926 649 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Cam04g0926 649 PANTHER - 34 613 IPR050528 GO:0005886(PANTHER)
Cam04g0926 649 FunFam L-type lectin-domain containing receptor kinase S.4 416 621 - -
Cam04g0926 649 Pfam Legume lectin domain 28 264 IPR001220 GO:0030246(InterPro)
Cam04g0926 649 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 271 IPR013320 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0926 Cam-Chr4:23374184 Cam10g2096 Cam-Chr10:34632247 1.30E-214 dispersed
Cam04g0924 Cam-Chr4:23350593 Cam04g0926 Cam-Chr4:23374184 2.50E-168 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85125 PF07714 PK_Tyr_Ser-Thr 1.70E-44 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0926 - - - 0.0