Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0932 ATGGAAACCCATCTTCCGCCCCTGTTCTTTCTTCTCATTTTCCTCTCATTCTTCCTCTGCTGTCCTGCCAAGCGCTGCCCAGACTGCGGCCACACGCCGGTGCCGTACCCACTCAGCACAAGCCCAGATTGCGGCGACCCTCTTTACAGAGTCCGGTGCGCCGCCCCCGGACTCTGGTTCGAGTCCGTCAATGGGTCTTTCTATTTGATCACTTCCGTTAATCCGGTGGCACAGAGGCTGATCGTCCGGCCGCCAGGGTTGGCCAAAAACACCTGCGTTTCGTCGGATTTTGGTACCAGTGGTTTTTGGCTCGACACGCGCCTTCCTTTCACCATTTCCGATAGAAACACGGTTTTGCTCTACAACTGTTCGGTGGAAGTCCTCGAAAATAGTTGGAATTGTGCACCTAATAGCATCTGTCATGACTTTATCAGACAGAATCCGGTGGCAATGGCAGCGTGTAAGGTGGCGCCGACGTGCTGTTGGTACACAAGTGGCGGTTCCATGACTGCGTCTAGAATCAGGGTGCGAAAGGAGCGGTGTTCGGCTTATGAATGTTTTGTGAATATGGGTAGTTCTGTTCCGCCGAAGAAGTGGCCGGAACCTGGGGTCGAGATTCAATGGACACCACCCCGAGAGCCGGCATGTCGTGTGGCTACGGACTGCCGGAATTGGGTGAATTCTGCTTGTTCGCCGGACCCTGCAAACGCCGGGCAGAGGAGGTGCTTATGCAAGGTTCCTTTCAAGTGGGATCCTATAAATGGCTTGTGTAGTGGCAACAATTTGAAAATACAGAACAAGATAACTCACAAGAAGCACAAGAAGATGCCTGTTATTCTTGGAGCAATGGCGGGAGTATTTGTAATGGTGATTGGAGGTTCAATCATGTTTATAATTTCCAAAAGACGTCGACAGATTCCGAAGGGGAACGAGCTGAGTTCGAAACAAGTTCGTGAAGTGATTCTAACCGCCAACAGCAGTGGAAAATCGGCGAGGATGTTCACAACCAAAGAGATAGCAAAGGCTACAAACAACTTCTCCAAGGAGAATTTGCTTGGCTCTGGTGGCTATGGAGAGGTCTTCAAAGGCAACTTAGAAGATGGAACCTCAATAGCAGTTAAACGTGCAAAGTTGGGTAGCATGAAGGGTATTGATCAAATCCTGAACGAGGTTCGGATTCTTTGTCAGGTAAACCATCGATACCTCGTTCGTCTACTTGGATGTTGTCTCGAACTTGAGCAACCCCTCTTAATATATGAGTACATCTCGAATGGGAACCTGTTTGATCACCTTCATGGGAATACAAGTTCAAGCAAATGGCCACCGTTGACATTGAGTCGTCGACTCTGCATAGCTTGGCAAACAGCCGAGGGCCTTGCTTATCTCCATACTTCAGCCACACCGAGAATCTATCACCGAGACATAAAGTCGAGCAATATTCTACTAGACGAGAAGTTAAATGCCAAAGTAGCTGATTTTGGGCTGTCTAGATTGGCTATAACTGAATCAAGCCATATTACAACTGGGGCTCAGGGAACATTAGGTTATCTTGACCCAGAATATTACCTTAATTTCCAATTGACAGACAAGAGTGATGTTTATAGTTTTGGAGTTGTCATGTTGGAGCTATTGACTTCGGAGAAAGCCATTGATTTTAATAGGGAAGAGGAAGATGTAAATTTAGTAGTTTATATCAAGAAGATAATCCAAGAAGACAGATTGATGGAGGTTGTTGATCCTGTGATTAAACAGAGAGCAAGCAGAGTTGAAATGGAGATAATCAAGGCATTAGGGTCTTTAGCAGCAGCTTGCTTGGATGAAAAGAGGCAGAATAGACCTGCCATGAAAGAAGTTGCTGATGAGCTAGCCAATATTATTTCCATTCTTAATAATGAGGTTAGAAATATTGACTAA 1914 46.5 METHLPPLFFLLIFLSFFLCCPAKRCPDCGHTPVPYPLSTSPDCGDPLYRVRCAAPGLWFESVNGSFYLITSVNPVAQRLIVRPPGLAKNTCVSSDFGTSGFWLDTRLPFTISDRNTVLLYNCSVEVLENSWNCAPNSICHDFIRQNPVAMAACKVAPTCCWYTSGGSMTASRIRVRKERCSAYECFVNMGSSVPPKKWPEPGVEIQWTPPREPACRVATDCRNWVNSACSPDPANAGQRRCLCKVPFKWDPINGLCSGNNLKIQNKITHKKHKKMPVILGAMAGVFVMVIGGSIMFIISKRRRQIPKGNELSSKQVREVILTANSSGKSARMFTTKEIAKATNNFSKENLLGSGGYGEVFKGNLEDGTSIAVKRAKLGSMKGIDQILNEVRILCQVNHRYLVRLLGCCLELEQPLLIYEYISNGNLFDHLHGNTSSSKWPPLTLSRRLCIAWQTAEGLAYLHTSATPRIYHRDIKSSNILLDEKLNAKVADFGLSRLAITESSHITTGAQGTLGYLDPEYYLNFQLTDKSDVYSFGVVMLELLTSEKAIDFNREEEDVNLVVYIKKIIQEDRLMEVVDPVIKQRASRVEMEIIKALGSLAAACLDEKRQNRPAMKEVADELANIISILNNEVRNID 637
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23437721 23439822 + CaPI482276_04g009320.1 Cam04g0932 125010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0932 637 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 17 625 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cam04g0932 637 CDD STKc_IRAK 352 625 - -
Cam04g0932 637 Gene3D Transferase(Phosphotransferase) domain 1 422 635 - -
Cam04g0932 637 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524(InterPro)
Cam04g0932 637 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 318 421 - -
Cam04g0932 637 SMART serkin_6 346 629 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0932 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g0932 637 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
Cam04g0932 637 Pfam Protein tyrosine and serine/threonine kinase 349 622 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g0932 637 ProSiteProfiles Protein kinase domain profile. 346 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g0932 637 Gene3D Phosphorylase Kinase; domain 1 308 421 - -
Cam04g0932 637 FunFam Wall-associated receptor kinase-like 20 422 635 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0932 Cam-Chr4:23437721 Cam08g1060 Cam-Chr8:16957219 1.30E-78 dispersed
Cam02g1579 Cam-Chr2:28686186 Cam04g0932 Cam-Chr4:23437721 2.70E-36 transposed
Cam03g1120 Cam-Chr3:21657320 Cam04g0932 Cam-Chr4:23437721 1.10E-27 transposed
Cam10g1918 Cam-Chr10:33236267 Cam04g0932 Cam-Chr4:23437721 1.50E-151 transposed
Cam11g0692 Cam-Chr11:8550120 Cam04g0932 Cam-Chr4:23437721 6.40E-187 transposed
Cam11g0938 Cam-Chr11:14910907 Cam04g0932 Cam-Chr4:23437721 8.40E-76 transposed
Cam11g1931 Cam-Chr11:31700168 Cam04g0932 Cam-Chr4:23437721 2.90E-72 transposed
Cam02g2045 Cam-Chr2:33432112 Cam04g0932 Cam-Chr4:23437721 8.50E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85126 PF07714 PK_Tyr_Ser-Thr 1.80E-46 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0932 - - - 0.0