Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0964 ATGAGTGGCGCAAGATTCAGCATCAGAACTGGGCGAAGAAGACTGTCACAGATGACGAATTTCGCCTTCCAAGTTCTATTTGGCCGATGGTTCACCGTCTTCGCTTCTTTACTCATCATGTCCGTTTCCGGCGCCACCTACATGTTCGCACTCTACTCCGCTGACATCAAATCCTCCTTCAATTACGATCAGACCACTCTCAACCTCATCGGCTTCTTTAAGGATCTGGGTTCCAACGTCGGAATCTTTTCCGGCCTCATCAATGAAATTACTCCGCCTTGGGTCGTCCTATTCATCGGTGGGGTAATGAATTTCTTGGGCTATTTCATGATTTGGCTTTCTGTCACTCACCGAATCCCCAAACCCAAACTGCCCGCAATGTGTTTGTTTATATGCCTAGGTGCCAATTCTCAGACCTTTGCTAATACAGGGGCTTTGATCCCTTCTGTGAGGAATTTCCCCCGGAATCGAGGTAATGTATTGGGTTTATTAAAAGGGTTTGTTGGGTTAAGTGGGGCAATTTTGACTCAGATTTACCATGCTTTTTATGGGGATGATTCTAAGGATTTTATCTTGCTTATTGCTTGGTTGCCTACTGCTGTTTCTTTCCTGCTTCTTCGGATTGTTAGAGTAGTGGAAGTGAACCCAATATTTAAATCCAATGATCTAAAAAATTTCTATTCTATGCTCTACATTTCCCTTGGTCTTGCTGGCTTCCTCATGATTTTGATTATTGTTCAAAACGAGCTCATGTTTACTAGAATTCAGTATTTGGGTTGTGCGTTTGTTCTCCTAGCGTTTCTTTTTCTTCCACTTGTCGTTGTTATAAGAGAAGAATTCGCCATTAGGAAAAGGAAATTGCAAGGTGTGGATGTAACTTCTTGGCTTCCAGTTCCAACAGACCCATCTCCAGCTGAATTACCATTGCCTAGACCTTCAAGTGTGCCGACAACTGCCATAGCTTTAGCCAGCCCAAGTTCTTGCTTTGAAAACGTGTTCAAACCGCCAGAAAGAGGAGAGGACTACACCATTTTACAAGCAATCTTCAGTGTAGATATGTTGATTCTGTTTGTTGCTACAATTTGTGGGGCTGGTGGGACTTTGACTGCAATGGACAACTTGGGTCAGATAGGCAGCTCCCTTGGCTACTCAACTCATACCATTTCTACTTTCACTTCTCTAGTGAGTATATGGGGCTATCTCGGTCGAGCATTTTCGGGTTATGCTTCTGAATTCTTGTGGATGAAGTATAACTTCTCTCGCCCTCTGTTCCTCACTCTTGTGCTTCTTCTCTCTTGCGTTGGTCATCTTCTAATTGCCTCTGGAGTCCCAACCTCCCTTTACTTTGCTTCAGTTATCATTGGATTTTGCTTTGGAGCACAATGGCCATTGATTTTCGCCATTGTTTCTGAATTATTTGGCTTGAAATACTATGCAACTTTATATAGCATAAGCGGCATTGCTAGCCCAGTTGGCTCATACATTTTCAATGTGAAAGTAGCTGGCTATTTATATGACCAAGAGGCTAGAAAGCAAATGGCAGCCGTTGGTCGTAGAAGTGTAGCTGTGCCAGTCTGTGTAACACACTGTTTGTTTCAGCACGGTCGGAGATCTCGTTATTTCCCTTCTGTTCCGACATCTGAGAAAGAAGCGATTTCAGGAAAGTGA 1668 43.47 MSGARFSIRTGRRRLSQMTNFAFQVLFGRWFTVFASLLIMSVSGATYMFALYSADIKSSFNYDQTTLNLIGFFKDLGSNVGIFSGLINEITPPWVVLFIGGVMNFLGYFMIWLSVTHRIPKPKLPAMCLFICLGANSQTFANTGALIPSVRNFPRNRGNVLGLLKGFVGLSGAILTQIYHAFYGDDSKDFILLIAWLPTAVSFLLLRIVRVVEVNPIFKSNDLKNFYSMLYISLGLAGFLMILIIVQNELMFTRIQYLGCAFVLLAFLFLPLVVVIREEFAIRKRKLQGVDVTSWLPVPTDPSPAELPLPRPSSVPTTAIALASPSSCFENVFKPPERGEDYTILQAIFSVDMLILFVATICGAGGTLTAMDNLGQIGSSLGYSTHTISTFTSLVSIWGYLGRAFSGYASEFLWMKYNFSRPLFLTLVLLLSCVGHLLIASGVPTSLYFASVIIGFCFGAQWPLIFAIVSELFGLKYYATLYSISGIASPVGSYIFNVKVAGYLYDQEARKQMAAVGRRSVAVPVCVTHCLFQHGRRSRYFPSVPTSEKEAISGK 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 23683751 23685635 - CaPI482276_04g009640.1 Cam04g0964 125042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0964 555 Gene3D MFS general substrate transporter like domains 347 527 IPR036259 -
Cam04g0964 555 CDD MFS_Mch1p_like 28 506 - -
Cam04g0964 555 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 29 527 - GO:0016020(PANTHER)
Cam04g0964 555 Pfam Nodulin-like 29 276 IPR010658 -
Cam04g0964 555 SUPERFAMILY MFS general substrate transporter 30 506 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0248 Cam-Chr4:8369320 Cam04g0964 Cam-Chr4:23683751 3.80E-141 dispersed
Cam04g0964 Cam-Chr4:23683751 Cam08g1228 Cam-Chr8:18654438 4.70E-165 dispersed
Cam10g1964 Cam-Chr10:33579453 Cam04g0964 Cam-Chr4:23683751 2.10E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0964 - - - 0.0