Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g0967 | ATGCCGATCCGTAACATTGCAATTGGAAGGCCCGAAGAGGCTACTCATCCAGATGCTTTGAAGGCTGGGTTGGCTGAGTTCATTTCCACCTTGATCTTTGTTTTTGCTGGCCAAGGTTCCGGCATAGCCTTCAGTAAGCTTACCGAAGGCGGCGCCACCACTCCCGCCGGTCTCATCTCCGCCTCCATCGCCCACGCCTTCGCCCTTTTTGTTGCCGTCTCCGTTGGCGCTAACATCTCTGGTGGCCATGTCAACCCCGCCGTTACCTTCGGTGCCTTCGTCGGTGGTAACATCACCCTCCTACGTGGCATCATCTACTGGATTGCTCAACTCCTTGGATCCGTTGTCGCTTGCTTGCTCCTTAAATTCGTCACCGGCTTGCCCACCGGAAGCTTCGCTCTGTCAGCTGGAGTTGGAGAAATTAACGCCTTCGTTTTCGAGATCGTAATGACCTTCGGATTGGTGTACACAGTGTACGCGACCGCAGTGGATCCCAAGAAGGGCAGTTTGGGAACTATTGCACCCATCGCAATCGGTTTCATCGTCGGAGCTAACATTTTGGCCGGCGGAGCATTCACCGGAGCATCCATGAACCCGGCCGTGGCCTTCGGCCCATCAGTAGTGAGCTGGTCATGGAGCAGCCACTGGGTCTACTGGGCCGGGCCTCTGATCGGAGGTGGGCTCGCTGGTCTCATCTACGAGTTCATCTTCATTTCCAACACCCACGAGCAGCTCCCAACCACCGACTACTAA | 753 | 55.78 | MPIRNIAIGRPEEATHPDALKAGLAEFISTLIFVFAGQGSGIAFSKLTEGGATTPAGLISASIAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLLRGIIYWIAQLLGSVVACLLLKFVTGLPTGSFALSAGVGEINAFVFEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILAGGAFTGASMNPAVAFGPSVVSWSWSSHWVYWAGPLIGGGLAGLIYEFIFISNTHEQLPTTDY | 250 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 23710415 | 23711660 | - | CaPI482276_04g009670.1 | Cam04g0967 | 125045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g0967 | 250 | ProSitePatterns | MIP family signature. | 83 | 91 | IPR022357 | - | |
Cam04g0967 | 250 | CDD | MIP | 21 | 236 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | Gene3D | Glycerol uptake facilitator protein. | 4 | 250 | IPR023271 | - | |
Cam04g0967 | 250 | SUPERFAMILY | Aquaporin-like | 13 | 246 | IPR023271 | - | |
Cam04g0967 | 250 | FunFam | Probable aquaporin TIP1-1 | 4 | 250 | - | - | |
Cam04g0967 | 250 | Pfam | Major intrinsic protein | 14 | 233 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PRINTS | Major intrinsic protein family signature | 102 | 121 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PRINTS | Major intrinsic protein family signature | 146 | 164 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PRINTS | Major intrinsic protein family signature | 216 | 236 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PRINTS | Major intrinsic protein family signature | 65 | 89 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PRINTS | Major intrinsic protein family signature | 179 | 201 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PRINTS | Major intrinsic protein family signature | 21 | 40 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cam04g0967 | 250 | PANTHER | AQUAPORIN-8 | 5 | 246 | IPR034294 | GO:0006833(PANTHER)|GO:0009705(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam04g0967 | Cam-Chr4:23710415 | Cam05g2298 | Cam-Chr5:31095131 | 2.40E-28 | dispersed | |
Cam01g0423 | Cam-Chr1:4653305 | Cam04g0967 | Cam-Chr4:23710415 | 1.00E-79 | transposed | |
Cam01g0504 | Cam-Chr1:5337987 | Cam04g0967 | Cam-Chr4:23710415 | 2.50E-44 | transposed | |
Cam01g1519 | Cam-Chr1:28726109 | Cam04g0967 | Cam-Chr4:23710415 | 4.80E-80 | transposed | |
Cam08g1685 | Cam-Chr8:23122376 | Cam04g0967 | Cam-Chr4:23710415 | 1.20E-64 | transposed | |
Cam09g0182 | Cam-Chr9:2580487 | Cam04g0967 | Cam-Chr4:23710415 | 8.20E-77 | transposed | |
Cam09g2056 | Cam-Chr9:35147693 | Cam04g0967 | Cam-Chr4:23710415 | 4.70E-96 | transposed | |
Cam10g1958 | Cam-Chr10:33529225 | Cam04g0967 | Cam-Chr4:23710415 | 2.90E-101 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g0967 | K09873 | - | csv:101204225 | 463.766 |