Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g0986 ATGCAGCTTCCATTCAGTGGCTTCTTGCTCCCCTTCAGTCTCCTAGCTCTCATTTTTCCAGTGGCTACCAGTGATCCTCTTGTGCCTGCACTCTGCATCTTCGGGGACTCGGTCGTCGATGTCGGAAATAACAACAATCTTCTAACAGTTGTCAAGGCTAACTTTCCTCCTTATGGAAGAGACTTTGTTACTCATACACCAACAGGAAGGTTTTGCAATGGAAAGCTTGCCACTGATTTTACCGCTGAATTCCTTGGATTTTCTTCATATCCTCCTGCATATTTGAGCCAAGATGCCACTGGAAACAAGCTTTTAACAGGAGCCAACTTTGCTTCTGCTGCTTCTGGCTTTTATGATGGCACAGCTCAGCTCTATCATGCAGTTTCATTAACCCAGCAGTTGAATTATTACAAGGAATATCAAAGCAAAGTTGTGAACATGGTGGGAACAGAGAAAGCCAATGCCATATTCTCTGGCGCAATTCACCTTCTTAGTGCAGGCAGCAGTGATTTCATTCAGAATTACTATGTTAATCCTCTTCTTTACAGAACATACTCACCACAGCAATTCTCTGACATTCTCATTACATCTTTCTCCAACTTCATTCAGAACCTATATGGAATGGGAGCAAGGAGAATAGGGGTGACAGGGTTACCTCCATTGGGTTGCTTGCCAGCAGCTATCACCCTCTTTGGTTCTGGTAGCAACCAATGCATCCAAAGGTTAAATCAAGATGCCATTGCATTCAACACTAAGCTGCAAAGCACATCTCAGAGTTTGCAGAACAGATTCTCTGATCTCAAGCTTGTTGCCTTTGATATTTATCAACCTCTCTTGAATATGGTCTCGAAGCCTGCAGAAAATGGGTTTTTTGAGTCAAGAAGGGCTTGTTGTGGAACAGGAACAGTAGAGACTTCCTTCCTTTGCAACAGTAGATCAATTGGAACATGCTCAAATGCCACAGGCTATGTTTTCTGGGACGGTTTCCATCCAACCGAAGCCGCAAATCAAGTGTTGGCGGGGGATTTACTTACTCAGGGATTCAGCCTCATTTGA 1056 43.84 MQLPFSGFLLPFSLLALIFPVATSDPLVPALCIFGDSVVDVGNNNNLLTVVKANFPPYGRDFVTHTPTGRFCNGKLATDFTAEFLGFSSYPPAYLSQDATGNKLLTGANFASAASGFYDGTAQLYHAVSLTQQLNYYKEYQSKVVNMVGTEKANAIFSGAIHLLSAGSSDFIQNYYVNPLLYRTYSPQQFSDILITSFSNFIQNLYGMGARRIGVTGLPPLGCLPAAITLFGSGSNQCIQRLNQDAIAFNTKLQSTSQSLQNRFSDLKLVAFDIYQPLLNMVSKPAENGFFESRRACCGTGTVETSFLCNSRSIGTCSNATGYVFWDGFHPTEAANQVLAGDLLTQGFSLI 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24009168 24011459 + CaPI482276_04g009860.1 Cam04g0986 125064
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g0986 351 Gene3D SGNH hydrolase 21 347 IPR036514 -
Cam04g0986 351 FunFam GDSL esterase/lipase APG 21 347 - -
Cam04g0986 351 PANTHER GDSL ESTERASE/LIPASE EXL3 21 341 IPR050592 -
Cam04g0986 351 Pfam GDSL-like Lipase/Acylhydrolase 33 340 IPR001087 GO:0016788(InterPro)
Cam04g0986 351 CDD SGNH_plant_lipase_like 29 345 IPR035669 -
Cam04g0986 351 SUPERFAMILY SGNH hydrolase 154 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0986 Cam-Chr4:24009168 Cam07g1222 Cam-Chr7:26581574 6.10E-118 dispersed
Cam06g1758 Cam-Chr6:28809024 Cam04g0986 Cam-Chr4:24009168 2.20E-44 transposed
Cam02g2251 Cam-Chr2:35124273 Cam04g0986 Cam-Chr4:24009168 2.40E-135 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g0986 - - - 0.0