Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g1010 | ATGGGATCTGGTACTTGTGAAATTGTTGAAGCAAGGGAAGAAATAAAACCTGTTCAAAGTAAGGCAGGATCTCGTCATTCAGATTTTGTATCAGACAAAGATCGAAGACTTTCTGCATTGAAAATTGGATTCAAGGGATCTCTAGAGGATGATATCAATCAGCTTTTTGAGTCAATTAGTATTAAAAATGCATCCAAGAGTTTAGGTCATTCGCAAGTCGAGGTAAATGCACTGAGAAAAAGTACACTTAAGAAGCCAATAACTGTTGGCATACCTCGGTCACCAGGTATTGGTACTTCTGATTCTGGTAGTCTGAAGCAAGCACTTAGGGAACTATGCCTTTCAAAGGCGTCTGAAATGGCTGCTATGAAGAGATCATCAAAATCATCCAGCTCTTCAAGAATCTCAGAAGCTGGGCGGATCAAGACATTGTATAATTCAGTTATGGTTGAAGCCACTGAGTCAGGCTCTTCTTCAGATAAGGGGGGACGTGTGGTTGAAATTTCCCTGGTTCCAGAGGAAAAGAAATTGAACTTTGAGAAGAGACTTGAGCATGTCCAGGCATCTGCTGTTAAATCACTGGTTGAAAGTGCTCATTCTTCTCAGTTGCCCGCTGCGAAAACAAAAAAAAATGTTGAGGTTGTTACTGTGGAACAAAACGTCAATCCCACTTTGTCAAGGAAAGTTGGATCTCAAACATTAAAGGCAGAGCTGGAGAAGGAAGAAGAGTCCATTACTCCACCATCTATATCTTCTTGCACTATTGGCAAGGTCTTAGAGAAGGAGAAGAAAATTCTTGCCGGAAGCAGGGTAGCAAATAAAGTGGCATCATCTAAGGCAGGACGGAAAGGTAGGTTGCAAACTGCATCTTCATCTAAGTTGGGTAGTGGCAATAAGGTAACCAAGTTATCTAGAAGTGCCTCCCGTTCTGTTAAACCAGTTATTAGAAACAAGGGGCTGGCTAAGAAGAAAGTCAAACAGGATTTGAGTTCTCCAACATGTAGTTCAAGCACATACAATGCAGTCAATGGTGATACGGATCCTAGTAAAAGGAAGTTGATATGTGAGAGGTGCCACTGTGCAATGAATAGTGCAGCTAAAGACTCAAAGAAGGGCGCTGCATCCCAGTTTAGTGGTCTTTGTCCTGATGTAAACATGACCAATTCAAAATCTGGTGGTAACAAATCAGGCTTCAATGTGGATGGCAAGGCTTCTGATGTTAAAGTAAAAAGAAATACAAGGGTGCGGGATAAGGGTGAATTTTCTCAAAGCTCAAAAAGTAGTCAAGGTGAGTACAGTAGCAGTACGACGAGTATTATAAGTGACGATAGCAATGGGCACGGACCCAGTAATGGTAACAGACCTCATATGTCAAAAGATGTTAGGTGGGAAGCCATACGCCATGCACAATTGCAGTATGGGGTCCTCAGCTTGCGGCATTTTAATCTTTTAAAGAAGCTTGGTTGTGGGGACATTGGAACAGTGTATCTTGCTGAGCTAACCGGCACTAATTGCCTATTTGCCATTAAGGTCATGGATAATGAGTTTCTAGCAAGACGGAAGAAAATGCCTAGAGCACAAACTGAGAGAGAAATACTGAGAATGCTAGATCATCCATTCCTCCCTACACTTTATGTTCAATTTACTTCAGATAATCTATCATGTCTCGTCATGGAGTATTGTCCTGGAGGAGATCTTCATGTTCTGCGGCAGAAGCAGCTAGGCAGAGTTTTTCCTGAACCCGCAGCAAGATTTTATGTTGCTGAGGTCCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAGTTATTTATCGAGATTTAAAACCTGAGAACATTCTTGTCAGGGAAGATGGTCACATAATGCTTACCGACTTTGACCTGTCGCTTAGGTGCACGGTCAATCCAACACTCTTGAAGTCATCATCCTTCAATGCGGACTTGGTGAAAACATCAGGTCCCTGTACAGATTCTAGTTGTGCTGAGCCATTTTGCATTGAACCATCATGTCAAGTCCCATGCTTCAGCCCCAGGTTTCTACCTGCTGCTGCCAAAACAAGGAAGTCAAAACTTGACCTCACAACACAGTTCAGGTCATTGCCCCAGCTCGTTGCTGAACCCACTGATGCACGTTCGAATTCCTTCGTTGGCACTCATGAGTATTTGGCTCCCGAGATCATTAAAGGAGAGGGACATGGAGCTGCAGTTGATTGGTGGACGTTTGGTGTTTTTCTCTATGAGCTTCTGTATGGTAAAACCCCTTTCAAGGGTTCCAATAATGAAGAAACATTAGCCAATGTAATAATGCAGGGCCTCAGTTTTCCCGACAGCCCAATTGTTAGTTTCCAAGCAAGGGATCTTATCCGAGGACTGTTGGTAAAAGAACCCGAACACCGATTCGGGACAGAGAAAGGGGCTGCAGAGATCAAACAGCACCCGTTCTTCGAGGGGCTAAACTGGGCATTGATCCGGTGTGCAGTTCCTCCAGAACTTCCAGACTTATGTGATATGGACATTACAAGTATGATTGCTCAACAAAACAAGTTCAGAAAAATGAGTTACCCAGAGGAGTTTTCCGGATTACAAATCCTTTTCGTTACCTTGGTAGCCACTGGAAAACAGGAAATTTTAGGCCAACTTATGGAAATTTTCCAGACAAAAATGCCCAAGATTAAGACGAACCGTGTCAAGTATCCGGAGGGATGGGAGCTAATTGAACCAACTCTCCGAGAATTGCAAGCTAAGATGAGAGAAGCCGAGAATGACCCACATGATGGTAAGAGAAAATGTGAGACTTTGTGGCCTATATTCAAAATAGCCCATCAGAAAAGCCGCTATATATTTGACCTTTATCATCGAAGGAAGGAAATATCTAAGGAATTATTTGAATTCTGCTTGGATCAAGGCTATGCAGATCGTAACTTAATTGCAAAATGGAAGAAGCCTGGTTATGAACGTTTGTGCTGTCTAAGATGCATGCAACCCCGAGATCACAACTTTGCGACAACATGTGTGTGCCGGGTTCCCAAGCACCTGAGGGAGGAGAAGGTTATCGAGTGTGTGCATTGTGGTTGCAGGGGCTGCGCTAGTGGAGATTGA | 3096 | 43.25 | MGSGTCEIVEAREEIKPVQSKAGSRHSDFVSDKDRRLSALKIGFKGSLEDDINQLFESISIKNASKSLGHSQVEVNALRKSTLKKPITVGIPRSPGIGTSDSGSLKQALRELCLSKASEMAAMKRSSKSSSSSRISEAGRIKTLYNSVMVEATESGSSSDKGGRVVEISLVPEEKKLNFEKRLEHVQASAVKSLVESAHSSQLPAAKTKKNVEVVTVEQNVNPTLSRKVGSQTLKAELEKEEESITPPSISSCTIGKVLEKEKKILAGSRVANKVASSKAGRKGRLQTASSSKLGSGNKVTKLSRSASRSVKPVIRNKGLAKKKVKQDLSSPTCSSSTYNAVNGDTDPSKRKLICERCHCAMNSAAKDSKKGAASQFSGLCPDVNMTNSKSGGNKSGFNVDGKASDVKVKRNTRVRDKGEFSQSSKSSQGEYSSSTTSIISDDSNGHGPSNGNRPHMSKDVRWEAIRHAQLQYGVLSLRHFNLLKKLGCGDIGTVYLAELTGTNCLFAIKVMDNEFLARRKKMPRAQTEREILRMLDHPFLPTLYVQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRVFPEPAARFYVAEVLLALEYLHMLGVIYRDLKPENILVREDGHIMLTDFDLSLRCTVNPTLLKSSSFNADLVKTSGPCTDSSCAEPFCIEPSCQVPCFSPRFLPAAAKTRKSKLDLTTQFRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGKTPFKGSNNEETLANVIMQGLSFPDSPIVSFQARDLIRGLLVKEPEHRFGTEKGAAEIKQHPFFEGLNWALIRCAVPPELPDLCDMDITSMIAQQNKFRKMSYPEEFSGLQILFVTLVATGKQEILGQLMEIFQTKMPKIKTNRVKYPEGWELIEPTLRELQAKMREAENDPHDGKRKCETLWPIFKIAHQKSRYIFDLYHRRKEISKELFEFCLDQGYADRNLIAKWKKPGYERLCCLRCMQPRDHNFATTCVCRVPKHLREEKVIECVHCGCRGCASGD | 1031 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24292220 | 24299221 | - | CaPI482276_04g010100.1 | Cam04g1010 | 125088 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g1010 | 1031 | MobiDBLite | consensus disorder prediction | 283 | 311 | - | - | |
Cam04g1010 | 1031 | MobiDBLite | consensus disorder prediction | 271 | 346 | - | - | |
Cam04g1010 | 1031 | FunFam | serine/threonine-protein kinase D6PK-like | 709 | 832 | - | - | |
Cam04g1010 | 1031 | SUPERFAMILY | Protein kinase-like (PK-like) | 456 | 832 | IPR011009 | - | |
Cam04g1010 | 1031 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 602 | 614 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1010 | 1031 | FunFam | serine/threonine-protein kinase D6PK-like | 565 | 632 | - | - | |
Cam04g1010 | 1031 | MobiDBLite | consensus disorder prediction | 388 | 457 | - | - | |
Cam04g1010 | 1031 | CDD | STKc_phototropin_like | 479 | 835 | - | - | |
Cam04g1010 | 1031 | ProSitePatterns | G10 protein signature 2. | 1019 | 1028 | IPR018230 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | ProSiteProfiles | Protein kinase domain profile. | 481 | 814 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1010 | 1031 | PRINTS | G10 protein signature | 898 | 918 | IPR001748 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | PRINTS | G10 protein signature | 933 | 956 | IPR001748 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | PRINTS | G10 protein signature | 1019 | 1028 | IPR001748 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | PRINTS | G10 protein signature | 957 | 982 | IPR001748 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | PRINTS | G10 protein signature | 983 | 1008 | IPR001748 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | Gene3D | Transferase(Phosphotransferase) domain 1 | 561 | 630 | - | - | |
Cam04g1010 | 1031 | MobiDBLite | consensus disorder prediction | 422 | 452 | - | - | |
Cam04g1010 | 1031 | MobiDBLite | consensus disorder prediction | 404 | 421 | - | - | |
Cam04g1010 | 1031 | ProSitePatterns | G10 protein signature 1. | 986 | 1008 | IPR018230 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | FunFam | Serine/threonine-protein kinase D6PK-like | 479 | 564 | - | - | |
Cam04g1010 | 1031 | PANTHER | FLIPPASE KINASE 1-RELATED | 302 | 841 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cam04g1010 | 1031 | Gene3D | Transferase(Phosphotransferase) domain 1 | 707 | 832 | - | - | |
Cam04g1010 | 1031 | MobiDBLite | consensus disorder prediction | 328 | 345 | - | - | |
Cam04g1010 | 1031 | SMART | serkin_6 | 481 | 814 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1010 | 1031 | Pfam | Protein kinase domain | 711 | 814 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1010 | 1031 | Pfam | Protein kinase domain | 482 | 632 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1010 | 1031 | Pfam | Pre-mRNA-splicing factor BUD31 | 887 | 1029 | IPR001748 | GO:0005634(InterPro) | |
Cam04g1010 | 1031 | Gene3D | Phosphorylase Kinase; domain 1 | 479 | 560 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam04g1010 | Cam-Chr4:24292220 | Cam05g0015 | Cam-Chr5:621851 | 4.80E-147 | dispersed | |
Cam01g1304 | Cam-Chr1:24716914 | Cam04g1010 | Cam-Chr4:24292220 | 1.20E-77 | transposed | |
Cam09g0839 | Cam-Chr9:8679907 | Cam04g1010 | Cam-Chr4:24292220 | 1.20E-59 | transposed | |
Cam02g2273 | Cam-Chr2:35358595 | Cam04g1010 | Cam-Chr4:24292220 | 3.40E-197 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85129 | PF00069 | Pkinase | 7.70E-36 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g1010 | - | - | - | 0.0 |