Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g1016 ATGAAGCTGCACGAGAATCTTTTTGTATTTGTATTGCTTCTTTGGCTTGTTGCCTCATTTATGATCCACGGTTCAAACCACCATGAAATTAGAAAGCCATACATCGTGTATATGGGAGACTTGCCCGGCGGATCTCCGTCGTCCACGGTGGCGGATGACCACCACAACCTGCTTTTGGACGCCATTGGAGATGAAAAGATAGCGAGAGAGTCCAAAATCTACAGCTATGGAAAGAGCTTCAATGGGTTCGCCGCAAGACTTTTGCCTCACGAAGCCACCAAGCTGTCAAATGAGGAGGGTGTGGTTTCGGTATTTCGGAGCAGAAAGCAAAGAGTAGTGACGACAAGATCCTGGGACTTTTTGGGATTAGATCATCATTATTCCAAACGTAACCCTAAAATTGAGTCTAATCTCATTGTCGCCGTTTTGGATACGGGGATTTGGATTGACAGTCCTAGTTTCAACGATGAAGGCTATGGCCCACCACCCTCTAAATGGAAGGGCAAATGCGTCACTGGACCCAACTTCACAGCCTGCAACAACAAAGTAATCGGTGCGAATTACTTCGATCTGGAAAACGTAAGCCAATATCCAGAGTCGAGCGTGGCGGACACGGAGGGCCACGGCTCTCACACGGCGTCCACGGTGGCAGGTTCGGCCGTGGAGGGGGCGAGCTTGTACGGCCTGGCCAAAGGGACGGCGCGCGGCGGCGTGCCTTCAGCTCGAATTGCAGTCTACAAAGTGTGTTGGAGCATTTTCTGCAGCGAAATGGACCTTCTTGCTGGCTTCGATGAGGCAATCGCCGATGGCGTTGATTTGATTTCCGTCTCCATAGGGTCGCCGCCGATGGATTTCTTCAGGGACAGCCAAGCAATTGGGGCTTTTCATGCCATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTGGCGCCCTGGATTATGACCGTCGCTGCTACGGCCATTGATAGACGGTTCGTCACCGCTTTCAAACTCGGTAATGGCAACAAATTTACTGGACGTTCCATCAACACCTTCTCGCCAGAGAAAGAAATGTACTCTCTTACAAGCGGAGCCAAAGCGTCCAACAATGGCACACCCTATCAAGGAAATGCAAGTGCTTGTGATCCAGAAGCTATAAGCCAAAGCAAAGTGAAGGGAAAGATTGTATATTGCTTGAAAACTTACACAGACCCCTACATCAAATCCTTAGGAGGCACTGGAGTCATTCAACTCACTCGACAACAAGCTGATTATTCCTCCATTTTGCTTCTTCCTGGGGTTACCATCCCCTCACTCTCTGGCAAATACATTGATCTTTATATCAACTCCACCAAGAATCCTAAAGCTGTCATTTATAAGAGTAAAACTGTCAGAATTGATGCTCCCTTTGTTGCTTCTTTCTCATCTAGAGGGCCTCAGTTTATCAGTAGTAACATTCTCAAGCCTGATCTTTCTGCACCAGGGATAGACATCTTGGCTGCTTATACAAAACTAGCAAGTTTGACAGGGGATATGTCAGACAGTAGATATAGTTTATTCACTGTAATGTCAGGTACATCCATGGCCTGTCCTCATGCCACGGCGGCGGCTGCATATGTTAAGTCATTCCACCCCGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACCACTGCAACTCCAATGAAGATCAAATCCAAGGACGCTGTACTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCAGTGCATCCCGGCCTTATTTACAACATTTCGTTCAACTCCTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATCGGCCTACTTGATGGTAACAAGAAGCACAACTGCTCCAAGATCAAGCCTGCACAAGGAACCGATGGTCTCAACTACCCTACAATGCACAAACAGCTCTCAGATCCTGGTTCAGCCATCAAGGCGGTCTTTTATCGAACAGTGACTCATGTCGGGTATGGTCCATCATTGTACAGGGCAAATATATCATCTCCAGATGGCCTATCTGTCAAAGTTTTTCCAGACACCCTAAATTTTGTTAAGTTACATGAAACGAAAACATTTAAAGTTGTGGTGAAGGGAATACCTATGCCAGAAGGAATATGGATTCGATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCCTTATCTACAGGAAATTGATCTAA 2235 47.29 MKLHENLFVFVLLLWLVASFMIHGSNHHEIRKPYIVYMGDLPGGSPSSTVADDHHNLLLDAIGDEKIARESKIYSYGKSFNGFAARLLPHEATKLSNEEGVVSVFRSRKQRVVTTRSWDFLGLDHHYSKRNPKIESNLIVAVLDTGIWIDSPSFNDEGYGPPPSKWKGKCVTGPNFTACNNKVIGANYFDLENVSQYPESSVADTEGHGSHTASTVAGSAVEGASLYGLAKGTARGGVPSARIAVYKVCWSIFCSEMDLLAGFDEAIADGVDLISVSIGSPPMDFFRDSQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGNKFTGRSINTFSPEKEMYSLTSGAKASNNGTPYQGNASACDPEAISQSKVKGKIVYCLKTYTDPYIKSLGGTGVIQLTRQQADYSSILLLPGVTIPSLSGKYIDLYINSTKNPKAVIYKSKTVRIDAPFVASFSSRGPQFISSNILKPDLSAPGIDILAAYTKLASLTGDMSDSRYSLFTVMSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAVLGSGAGQINPTKAVHPGLIYNISFNSYISFLCKEGYNSTTIGLLDGNKKHNCSKIKPAQGTDGLNYPTMHKQLSDPGSAIKAVFYRTVTHVGYGPSLYRANISSPDGLSVKVFPDTLNFVKLHETKTFKVVVKGIPMPEGIWIRSALLEWNDSKHIVRSNILIYRKLI 744
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 24328320 24332795 - CaPI482276_04g010160.1 Cam04g1016 125094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g1016 744 Gene3D - 334 469 - -
Cam04g1016 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 736 IPR045051 -
Cam04g1016 744 ProSiteProfiles Serine proteases, subtilase domain profile. 117 590 - -
Cam04g1016 744 Pfam Fibronectin type-III domain 640 739 IPR041469 -
Cam04g1016 744 Pfam Subtilase family 136 579 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cam04g1016 744 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
Cam04g1016 744 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cam04g1016 744 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Cam04g1016 744 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cam04g1016 744 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 140 150 IPR023827 -
Cam04g1016 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 530 540 IPR023828 -
Cam04g1016 744 Gene3D - 607 742 - -
Cam04g1016 744 CDD Peptidases_S8_3 114 566 IPR034197 -
Cam04g1016 744 CDD PA_subtilisin_like 341 463 - -
Cam04g1016 744 SUPERFAMILY Subtilisin-like 5 617 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam04g1016 744 Gene3D Peptidase S8/S53 domain 138 603 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cam04g1016 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 112 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1016 Cam-Chr4:24328320 Cam07g0649 Cam-Chr7:12449397 1.40E-193 dispersed
Cam01g0099 Cam-Chr1:1296352 Cam04g1016 Cam-Chr4:24328320 3.80E-166 transposed
Cam05g2385 Cam-Chr5:31892024 Cam04g1016 Cam-Chr4:24328320 1.20E-163 transposed
Cam10g1878 Cam-Chr10:32797300 Cam04g1016 Cam-Chr4:24328320 6.10E-229 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g1016 - - - 0.0