Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g1076 | ATGCAAACCCAGATGGGAACTCGTTTCATTTCTTTCTTTCTTTTGGGATTCTGTTTTCTACTTCCCACTGTGAAACCAGATCTTGCTTCTGATAGAACAGCTCTTTTGGCCCTTCGTTCTGCTGTGGGTGGCCGAACTCTTATGCTTTGGAATGTGACTGATCAGAACCCCTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTTCGTCTTCCCGGAGCGGCGCTTTTCGGTCAATTACCGAATGGGATTTTTGGGAACTTGACTCACCTTCGTACACTCAGCCTTCGGCTCAATGCCCTTTCCGGTCAGCTCCCCTCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGCCTTGTCCCTGATTTCTTGTTTCAGCTTCGTGACCTTGTTCGTCTTAATTTGGCTTCCAATAACTTTTCTGGGGAGATCTCTTTCGGGTTCAACAATTTGACCCGTCTCAAAACTCTGTTCCTTGAGAAAAATCATCTCTCTGGGTCTATCCCGGACTTGAAGATCCCTCTGGATCAGTTCAACGTTTCTAACAATCAGTTAAATGGGTCGGTACCTAAGGGATTGCAGTCGTTTTCTTCGAGTTCCTTTTTGGGGAATTCTCTCTGTGGGCGTCCTCTTGAGTCTTGCTCTGGTGATCTTGTTGTGCCGACAGGGGAGGTTGGGAGCAATGGCGGCTCTGGACACAAGAAAAAGTTGTCAGGGGGAGCCATTGCTGGAATTGTTATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAGAGTTCTAAGAAAACGAGTTCGGTCGATGTAGCCACAGTGAAGCATCCTGAAGTGGAAATTCATGGCGGTAAGCCAGCTGAGGAGATTGAAAATGGGGGTTACAGTAATGGTTATGCTGTGCCAGCCACTGCTGCTGCTGCTTCTGCTGCAACAGTGGCGGCCGGTACTGCAAAGGGGGAAGTGAATGCCAATGGTACTGGGACTAAAAAATTGGTGTTTTTTGGCAATGCTGCAAGGGTGTTTGATTTGGAGGATCTTTTGAGGGCTTCAGCTGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCAGTTTTGGAAGTGGGTTCTGTTGTGGCTGTGAAGAGGTTGAAGGATGTTACTATAACAGAGAGGGAATTCAGAGAGAAGATCGAAGCTGTTGGATCTATGGATCATGAAAATTTGGTCCCTCTCAGGGCTTACTATTTCAGTAGGGATGAGAAGCTTCTTGTCTATGATTACATGGCCATGGGAAGCTTATCTGCTCTTTTACATGGAAACAAAGGAGCTGGCAGGACTCCATTGAATTGGGAAATCAGATCTGGAATTGCGCTTGGAGCTGCTCGTGGCATTGAATATCTGCATTCTCAAGGCCCTAATGTTTCCCATGGAAACATAAAATCTTCCAATATTCTTCTAACAAAATCCTATGATTCTCGAGTCTCCGATTTCGGTTTAGCACATCTTGTTGGACCACCTTCCAGCCCCACCAGAGTTGCTGGTTACCGTGCACCAGAGGTCACCGATCCTCGTAAAGTATCCCACAAGGCTGATGTCTATAGCTTTGGCGTATTGCTATTGGAGCTTTTGACAGGAAAGGCTCCTACTCACTCCCTTTTAAACGAGGAAGGAGTTGATCTACCCAGATGGGTGCAGTCAGTTGTTAGGGAGGAGTGGACTTCCGAAGTTTTTGACCTCGAGCTTCTTAGGTACCAAAACGTTGAGGAGGAGATGGTTCAGCTATTGCAGCTTGCAGTCGATTGTGCAGCTCAGTATCCTGATAAGCGTCCTACTATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTTCACGAAGCTGTCAATCCACAACCCGACGCTGCTCATGACTCAGACGATGTGTCTTCTAGGTGA | 1989 | 46.76 | MQTQMGTRFISFFLLGFCFLLPTVKPDLASDRTALLALRSAVGGRTLMLWNVTDQNPCSWPGIQCEDNRVTVLRLPGAALFGQLPNGIFGNLTHLRTLSLRLNALSGQLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLRDLVRLNLASNNFSGEISFGFNNLTRLKTLFLEKNHLSGSIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSSSFLGNSLCGRPLESCSGDLVVPTGEVGSNGGSGHKKKLSGGAIAGIVIGSVLGFVLILVILMLLCRKKSSKKTSSVDVATVKHPEVEIHGGKPAEEIENGGYSNGYAVPATAAAASAATVAAGTAKGEVNANGTGTKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGSVVAVKRLKDVTITEREFREKIEAVGSMDHENLVPLRAYYFSRDEKLLVYDYMAMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDSRVSDFGLAHLVGPPSSPTRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEAVNPQPDAAHDSDDVSSR | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 24924712 | 24927259 | + | CaPI482276_04g010760.1 | Cam04g1076 | 125154 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g1076 | 662 | FunFam | Probable inactive receptor kinase RLK902 | 28 | 185 | - | - | |
Cam04g1076 | 662 | ProSitePatterns | Protein kinases ATP-binding region signature. | 374 | 396 | IPR017441 | GO:0005524(InterPro) | |
Cam04g1076 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 336 | 442 | - | - | |
Cam04g1076 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 443 | 658 | - | - | |
Cam04g1076 | 662 | ProSiteProfiles | Protein kinase domain profile. | 368 | 646 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1076 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 372 | 642 | IPR011009 | - | |
Cam04g1076 | 662 | Pfam | Protein kinase domain | 372 | 632 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1076 | 662 | Gene3D | Ribonuclease Inhibitor | 187 | 230 | IPR032675 | - | |
Cam04g1076 | 662 | PANTHER | OS05G0588300 PROTEIN | 11 | 653 | IPR050994 | - | |
Cam04g1076 | 662 | Pfam | Leucine rich repeat N-terminal domain | 29 | 65 | IPR013210 | - | |
Cam04g1076 | 662 | Pfam | Leucine Rich Repeat | 143 | 164 | IPR001611 | GO:0005515(InterPro) | |
Cam04g1076 | 662 | Pfam | Leucine Rich Repeat | 118 | 140 | IPR001611 | GO:0005515(InterPro) | |
Cam04g1076 | 662 | Gene3D | Ribonuclease Inhibitor | 28 | 186 | IPR032675 | - | |
Cam04g1076 | 662 | FunFam | pollen receptor-like kinase 1 | 337 | 442 | - | - | |
Cam04g1076 | 662 | MobiDBLite | consensus disorder prediction | 639 | 662 | - | - | |
Cam04g1076 | 662 | CDD | STKc_IRAK | 374 | 637 | - | - | |
Cam04g1076 | 662 | FunFam | Probable inactive receptor kinase At1g48480 | 443 | 645 | - | - | |
Cam04g1076 | 662 | SUPERFAMILY | L domain-like | 31 | 212 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam04g1076 | Cam-Chr4:24924712 | Cam11g0283 | Cam-Chr11:4305745 | 3.40E-130 | dispersed | |
Cam01g0875 | Cam-Chr1:10246795 | Cam04g1076 | Cam-Chr4:24924712 | 1.30E-126 | transposed | |
Cam05g1297 | Cam-Chr5:13251721 | Cam04g1076 | Cam-Chr4:24924712 | 5.50E-165 | transposed | |
Cam09g2146 | Cam-Chr9:36011224 | Cam04g1076 | Cam-Chr4:24924712 | 2.70E-54 | transposed | |
Cam10g1796 | Cam-Chr10:32137158 | Cam04g1076 | Cam-Chr4:24924712 | 6.20E-39 | wgd | |
Cam04g1076 | Cam-Chr4:24924712 | Cam06g1551 | Cam-Chr6:26985650 | 2.10E-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85131 | PF00069 | Pkinase | 4.60E-39 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g1076 | - | - | - | 0.0 |