Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g1076 ATGCAAACCCAGATGGGAACTCGTTTCATTTCTTTCTTTCTTTTGGGATTCTGTTTTCTACTTCCCACTGTGAAACCAGATCTTGCTTCTGATAGAACAGCTCTTTTGGCCCTTCGTTCTGCTGTGGGTGGCCGAACTCTTATGCTTTGGAATGTGACTGATCAGAACCCCTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTTCGTCTTCCCGGAGCGGCGCTTTTCGGTCAATTACCGAATGGGATTTTTGGGAACTTGACTCACCTTCGTACACTCAGCCTTCGGCTCAATGCCCTTTCCGGTCAGCTCCCCTCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGCCTTGTCCCTGATTTCTTGTTTCAGCTTCGTGACCTTGTTCGTCTTAATTTGGCTTCCAATAACTTTTCTGGGGAGATCTCTTTCGGGTTCAACAATTTGACCCGTCTCAAAACTCTGTTCCTTGAGAAAAATCATCTCTCTGGGTCTATCCCGGACTTGAAGATCCCTCTGGATCAGTTCAACGTTTCTAACAATCAGTTAAATGGGTCGGTACCTAAGGGATTGCAGTCGTTTTCTTCGAGTTCCTTTTTGGGGAATTCTCTCTGTGGGCGTCCTCTTGAGTCTTGCTCTGGTGATCTTGTTGTGCCGACAGGGGAGGTTGGGAGCAATGGCGGCTCTGGACACAAGAAAAAGTTGTCAGGGGGAGCCATTGCTGGAATTGTTATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAGAGTTCTAAGAAAACGAGTTCGGTCGATGTAGCCACAGTGAAGCATCCTGAAGTGGAAATTCATGGCGGTAAGCCAGCTGAGGAGATTGAAAATGGGGGTTACAGTAATGGTTATGCTGTGCCAGCCACTGCTGCTGCTGCTTCTGCTGCAACAGTGGCGGCCGGTACTGCAAAGGGGGAAGTGAATGCCAATGGTACTGGGACTAAAAAATTGGTGTTTTTTGGCAATGCTGCAAGGGTGTTTGATTTGGAGGATCTTTTGAGGGCTTCAGCTGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCAGTTTTGGAAGTGGGTTCTGTTGTGGCTGTGAAGAGGTTGAAGGATGTTACTATAACAGAGAGGGAATTCAGAGAGAAGATCGAAGCTGTTGGATCTATGGATCATGAAAATTTGGTCCCTCTCAGGGCTTACTATTTCAGTAGGGATGAGAAGCTTCTTGTCTATGATTACATGGCCATGGGAAGCTTATCTGCTCTTTTACATGGAAACAAAGGAGCTGGCAGGACTCCATTGAATTGGGAAATCAGATCTGGAATTGCGCTTGGAGCTGCTCGTGGCATTGAATATCTGCATTCTCAAGGCCCTAATGTTTCCCATGGAAACATAAAATCTTCCAATATTCTTCTAACAAAATCCTATGATTCTCGAGTCTCCGATTTCGGTTTAGCACATCTTGTTGGACCACCTTCCAGCCCCACCAGAGTTGCTGGTTACCGTGCACCAGAGGTCACCGATCCTCGTAAAGTATCCCACAAGGCTGATGTCTATAGCTTTGGCGTATTGCTATTGGAGCTTTTGACAGGAAAGGCTCCTACTCACTCCCTTTTAAACGAGGAAGGAGTTGATCTACCCAGATGGGTGCAGTCAGTTGTTAGGGAGGAGTGGACTTCCGAAGTTTTTGACCTCGAGCTTCTTAGGTACCAAAACGTTGAGGAGGAGATGGTTCAGCTATTGCAGCTTGCAGTCGATTGTGCAGCTCAGTATCCTGATAAGCGTCCTACTATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTTCACGAAGCTGTCAATCCACAACCCGACGCTGCTCATGACTCAGACGATGTGTCTTCTAGGTGA 1989 46.76 MQTQMGTRFISFFLLGFCFLLPTVKPDLASDRTALLALRSAVGGRTLMLWNVTDQNPCSWPGIQCEDNRVTVLRLPGAALFGQLPNGIFGNLTHLRTLSLRLNALSGQLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLRDLVRLNLASNNFSGEISFGFNNLTRLKTLFLEKNHLSGSIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSSSFLGNSLCGRPLESCSGDLVVPTGEVGSNGGSGHKKKLSGGAIAGIVIGSVLGFVLILVILMLLCRKKSSKKTSSVDVATVKHPEVEIHGGKPAEEIENGGYSNGYAVPATAAAASAATVAAGTAKGEVNANGTGTKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGSVVAVKRLKDVTITEREFREKIEAVGSMDHENLVPLRAYYFSRDEKLLVYDYMAMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDSRVSDFGLAHLVGPPSSPTRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEAVNPQPDAAHDSDDVSSR 662
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
4 24924712 24927259 + CaPI482276_04g010760.1 Cam04g1076 125154
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam04g1076 662 FunFam Probable inactive receptor kinase RLK902 28 185 - -
Cam04g1076 662 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524(InterPro)
Cam04g1076 662 Gene3D Phosphorylase Kinase; domain 1 336 442 - -
Cam04g1076 662 Gene3D Transferase(Phosphotransferase) domain 1 443 658 - -
Cam04g1076 662 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1076 662 SUPERFAMILY Protein kinase-like (PK-like) 372 642 IPR011009 -
Cam04g1076 662 Pfam Protein kinase domain 372 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1076 662 Gene3D Ribonuclease Inhibitor 187 230 IPR032675 -
Cam04g1076 662 PANTHER OS05G0588300 PROTEIN 11 653 IPR050994 -
Cam04g1076 662 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Cam04g1076 662 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515(InterPro)
Cam04g1076 662 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515(InterPro)
Cam04g1076 662 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Cam04g1076 662 FunFam pollen receptor-like kinase 1 337 442 - -
Cam04g1076 662 MobiDBLite consensus disorder prediction 639 662 - -
Cam04g1076 662 CDD STKc_IRAK 374 637 - -
Cam04g1076 662 FunFam Probable inactive receptor kinase At1g48480 443 645 - -
Cam04g1076 662 SUPERFAMILY L domain-like 31 212 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1076 Cam-Chr4:24924712 Cam11g0283 Cam-Chr11:4305745 3.40E-130 dispersed
Cam01g0875 Cam-Chr1:10246795 Cam04g1076 Cam-Chr4:24924712 1.30E-126 transposed
Cam05g1297 Cam-Chr5:13251721 Cam04g1076 Cam-Chr4:24924712 5.50E-165 transposed
Cam09g2146 Cam-Chr9:36011224 Cam04g1076 Cam-Chr4:24924712 2.70E-54 transposed
Cam10g1796 Cam-Chr10:32137158 Cam04g1076 Cam-Chr4:24924712 6.20E-39 wgd
Cam04g1076 Cam-Chr4:24924712 Cam06g1551 Cam-Chr6:26985650 2.10E-66 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85131 PF00069 Pkinase 4.60E-39 CL0016 Cam PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g1076 - - - 0.0