Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g1093 | ATGTGGATGATGGGTTACAATGACGCTACAGATTTGAACTTCCCTTCCGATAACTCTTTCAATTCTCGCAAACTTAGACCTCTAATTCCTCGCCCTCTCTCTTCTTCTTCCTCTTCCTCCATTAACAATCTCATCCCCACCAACGATTTCTTCTCCCAATTTCATCACATGGCGACGGTGACGGATCAAAGTAAGAGAGAGTTGAACAATGTGTCGTCGTTGTCACCGCCTGTGGTGGTGAGCTCGCGGTGGAATCCGACGCCTGAGCAGTTGAGAGTGTTGGAGGAATTGTATCGGCGGGGGACTCGAACCCCCTCTGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGTTACGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTCCAAAATCATAAAGCTAGAGAACGGCAGAAACGTCGTCGTCAGATGGAATCCGCCATCACTGCCGCCGACCTCTCGACTCCCGATGCCGAAATCCTCGAAAGGAAAGATTCAGGGTCGGGCAGAACAGTGTATGAAGAACAGACCAAAAACTGGGTGCCCTCTACAAACTGCAGTACACTTCCGGAGGAATCTGTTCCAATTCAAAGGGCGGCAAAAGGTAGTGTAATTGGAGGAGCAGATTGCAGAACAGAAAATGGATGGATTCAATTCGAGGAATTGCACCAAATAAGGAATAACAACACAACCAACAACAACAACTTTGCTGAAAAAAATACCAATAACATCAACAACAATATTAACAATTCAGCCTCCTTACAATTGATGCATTGTCCGGCAGCCGCTCTACGTGGTGGCGGTGGCGGTGGCGGCGGCAGCGGCAGCCAACTAATGATGAACATTGCCCCCATCACTACCACAGCCACAGTGACAACAATAATGCACCCAAAATCTCATAGAAGAAGTAATATTTCAGGTAATTTTAATATAATTGGAGCCTACACTCAAAATGGGGTTGAAGAATTGGAAGAAATAGAAGAAGAATTAGAATTAGAAGAAGAAGAAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGTGTGGGGAATCTGAAACCCTACAACTTTTTCCATTGTGCAGCGACACAAGAAATGGTGAGACTATTGGTGGCCAAAATGGGTGTGAAACAGTGGAAAATTCAGCCATGAATAGTACTAATCTGACTCCACTTCAGTTCTTTGAATTCCTTCCATTGAAGAATTGA | 1215 | 45.35 | MWMMGYNDATDLNFPSDNSFNSRKLRPLIPRPLSSSSSSSINNLIPTNDFFSQFHHMATVTDQSKRELNNVSSLSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAITAADLSTPDAEILERKDSGSGRTVYEEQTKNWVPSTNCSTLPEESVPIQRAAKGSVIGGADCRTENGWIQFEELHQIRNNNTTNNNNFAEKNTNNINNNINNSASLQLMHCPAAALRGGGGGGGGSGSQLMMNIAPITTTATVTTIMHPKSHRRSNISGNFNIIGAYTQNGVEELEEIEEELELEEEEEGGGGGGGGGGCGESETLQLFPLCSDTRNGETIGGQNGCETVENSAMNSTNLTPLQFFEFLPLKN | 404 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25090649 | 25093690 | + | CaPI482276_04g010930.1 | Cam04g1093 | 125171 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g1093 | 404 | FunFam | WUSCHEL-related homeobox 4 | 81 | 148 | - | - | |
Cam04g1093 | 404 | SMART | HOX_1 | 79 | 146 | IPR001356 | GO:0003677(InterPro) | |
Cam04g1093 | 404 | Pfam | Homeodomain | 82 | 141 | IPR001356 | GO:0003677(InterPro) | |
Cam04g1093 | 404 | PANTHER | WUSCHEL-RELATED HOMEOBOX 1-RELATED | 76 | 400 | IPR044555 | GO:0003700(InterPro)|GO:0099402(InterPro) | |
Cam04g1093 | 404 | SUPERFAMILY | Homeodomain-like | 81 | 148 | IPR009057 | - | |
Cam04g1093 | 404 | CDD | homeodomain | 83 | 143 | IPR001356 | GO:0003677(InterPro) | |
Cam04g1093 | 404 | Gene3D | - | 81 | 148 | - | - | |
Cam04g1093 | 404 | ProSiteProfiles | 'Homeobox' domain profile. | 87 | 142 | IPR001356 | GO:0003677(InterPro) | |
Cam04g1093 | 404 | Coils | Coil | 319 | 339 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam01g2067 | Cam-Chr1:33723144 | Cam04g1093 | Cam-Chr4:25090649 | 1.50E-22 | dispersed | |
Cam02g2120 | Cam-Chr2:33962897 | Cam04g1093 | Cam-Chr4:25090649 | 2.30E-23 | dispersed | |
Cam03g0161 | Cam-Chr3:2509282 | Cam04g1093 | Cam-Chr4:25090649 | 1.60E-25 | dispersed | |
Cam04g1093 | Cam-Chr4:25090649 | Cam08g2084 | Cam-Chr8:26379642 | 1.30E-23 | dispersed | |
Cam01g2401 | Cam-Chr1:35953333 | Cam04g1093 | Cam-Chr4:25090649 | 1.00E-14 | transposed | |
Cam04g1093 | Cam-Chr4:25090649 | Cam06g1576 | Cam-Chr6:27244752 | 6.30E-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
51787 | PF00046 | Homeodomain | 1.70E-19 | CL0123 | Cam | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g1093 | - | - | - | 0.0 |