Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam04g1097 | ATGTCCAGTGGTCAGTCTGACGATGCAGCTGAAGGGTCTACTTCATCGAGGAGCAGTAAATTAATGGAGGTTTCTTCGCCTGATAAGCTGCCGTCTCGCTCCCGAACGACCCATTTCAATTCGGAGCATAAACCCTTCTCGGGGTTATCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCCAGTCCTCCATCATCTTCCAATCCTACTGCAGGCGAGTTAATGGAGCCATCAGATTCAGTTTCTAGCAGAGATGCTGCAATGGATACATCTAGGCATGATTCAGGGTCGAGTAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAACTGAGTGCTAGAGAGGATCCTGAGGCAGCTCAGATTGAGGCTGTGAAGCAGATTAGTTTGGGGTCATGTGATCCTGATAACACACCAGCTGAAGTTATTGCCTTCAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGAGTCTTCACTGAGTCCACCTCAGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATTAATAAAGCTGCTGATGCTAACTTGTTGAAACTTGAACAGACAGCATTGGAGATGGCTATCAAAATGGGGACGGAATCCCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCAGATCATATGGGGGGACCAGTAGGCGATCCTGAAAAGATGTTGAGAAAATGGAGAAATCTTAGTTACGGCTTGAAAGCAACCCTTGGCAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCAGATGGCGTGGGTATTCCTTGTAGGTTGGTGAAGGGACCACAGTACACAGGTTCTGATGATGTGGCGATGAACTTCGTAAAGATTGATGATGGAAGGGAGTACATTGTGGATTTAATGGCAGATCCTGGTGCACTTATTCCAGCTGATGTTGCTGGATCGCATGTAGAGTATGATGGATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCTTCTCAGGCAGCATCTTCAAGCAGTGGGGTTGGCAGTTCACTAGAGGGAAATTCAGATTTTGGGATATCAGATAGGAAACCAAAGTTTCGGAATCTCAGTGCCACAAAGGAATATGATTCTCCCAATGTTGACAAGGGGCCATCACGTGATTTTGCTAGCAAATCAAATTATCCTGGCATGCACGTTAGATCACCTTCTTGGACTGAGGGTGTTAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGGTTGGCTCAAAAGCTTCATGACGTGTTACTTGAAAGTGGTGTGGTTGCTCCCCCTAACTTGTTTACTGAGGCATACCCTGACCAAATAGATGTTATTGTTGAGTCTAAGTCACCAACGGAAGACAAGGATCAAAGTAGAAAGGTGCCTGGTCTCTGTGAAAGTGTAGATAAGAATGATCCTCGTCCAGCTAACTTTTTGCCTCCCTTGCCTCAGCCCAGAATGCATTCTAGAGCCAGCCCTACCCATGGCCAACAACTGCACCTTAAACCTCTGGAATTTAACCTTTCTCTTGATCCAAGAGAAGCAGCCGGACAACCTATAGCCTTACCTTTTGAGGTAACACCAGTGAAGTATGGGAGAAATGTACCTGTTGCTGCAGCAGCAGCAGCTGCCGCAGCTGTTGTTGCATCATCAATGGTGGTAGCTGCAGCAAAGAGTACCGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACTGCCACTGCTGCTGCAGTGGTTGCAACAACTGCAGCAGTCAACAAGCAATATGAGCAGGTTGAGGCCGACGCTACTCTTTATGAGCAGCGTGGAAGTGGAGATAGGGAGCATGATGCTTGTGGAGAAAATTCAGAGGGTGAACGAATATCAGATAGATCAGTTGGTAACGAAAGCACAAAATCCGATATTACTCTTGATGATGTTGCAGAATGCGAGATCCCATGGGAAGAAATCTCCTTGGGAGAGCGTATTGGGCTTGGATCATATGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGACATTTCTGGCGAATCTCTTGAAGAATTCAAAAGTGAGGTTCGAATTATGAAAAGGCTTCGGCATCCGAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCCACCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATTCACCGTCCCAACAATCAATTAGATGAACGAAAGCGATTGAGGATGGCCCTTGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCACGCCTGTTGTTGTACATCGTGATTTGAAGTCCCCAAATCTACTTGTTGATAAAAATTGGGTTGTGAAGGTATGTGATTTTGGTTTATCTAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCTGGAACTGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACCTTCAGATGAAAAGTGTGACGTTTATAGTTATGGAGTCATACTATGGGAGCTGTCTACAATGCAACAACCATGGGGAGGAATGAACCCAATGCAAGTTGTTGGTGCTGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATTTAGATCCTGCCATTGCTGACATTATTAGGAAATGCTGGCAAACAGATCCAAGATTAAGACCTTCATTTGCTGAGATTATGGCTGCGCTAAAGCCGCTGCAGAAGCCAATGTCGAGTTCTCAAGTACCGAGACCAAATGCTCCTGCAGGTAGTAGTCGTGACAAGGCTCGATTATTGCAAGTTGCTGAAGACCCATCAGGCTAG | 3006 | 45.54 | MSSGQSDDAAEGSTSSRSSKLMEVSSPDKLPSRSRTTHFNSEHKPFSGLSGWLNSVTNRRSPSPPSSSNPTAGELMEPSDSVSSRDAAMDTSRHDSGSSNSRDPDIEEEYQIQLALELSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTESTSERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKMGTESPISVNSYLVRKLAVLVSDHMGGPVGDPEKMLRKWRNLSYGLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVGIPCRLVKGPQYTGSDDVAMNFVKIDDGREYIVDLMADPGALIPADVAGSHVEYDGSPFSASPLSRDVDSSQAASSSSGVGSSLEGNSDFGISDRKPKFRNLSATKEYDSPNVDKGPSRDFASKSNYPGMHVRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDQSRKVPGLCESVDKNDPRPANFLPPLPQPRMHSRASPTHGQQLHLKPLEFNLSLDPREAAGQPIALPFEVTPVKYGRNVPVAAAAAAAAAVVASSMVVAAAKSTDANLEIPVAAAATATAAAVVATTAAVNKQYEQVEADATLYEQRGSGDREHDACGENSEGERISDRSVGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPHLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHNCTPVVVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNLDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPMSSSQVPRPNAPAGSSRDKARLLQVAEDPSG | 1001 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 25112975 | 25125745 | - | CaPI482276_04g010970.1 | Cam04g1097 | 125175 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 41 | 78 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 662 | 689 | - | - | |
Cam04g1097 | 1001 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 831 | 843 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | CDD | STKc_MAP3K-like | 718 | 964 | - | - | |
Cam04g1097 | 1001 | Gene3D | Transferase(Phosphotransferase) domain 1 | 791 | 976 | - | - | |
Cam04g1097 | 1001 | Pfam | Protein tyrosine and serine/threonine kinase | 713 | 964 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 662 | 695 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 968 | 1001 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 1 | 106 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 370 | 396 | - | - | |
Cam04g1097 | 1001 | ProSiteProfiles | Protein kinase domain profile. | 712 | 968 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | ProSitePatterns | Protein kinases ATP-binding region signature. | 718 | 739 | IPR017441 | GO:0005524(InterPro) | |
Cam04g1097 | 1001 | SMART | serkin_6 | 712 | 967 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | SUPERFAMILY | Protein kinase-like (PK-like) | 693 | 962 | IPR011009 | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 510 | 558 | - | - | |
Cam04g1097 | 1001 | FunFam | Serine/threonine-protein kinase CTR1 | 791 | 974 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 87 | 106 | - | - | |
Cam04g1097 | 1001 | PRINTS | Tyrosine kinase catalytic domain signature | 825 | 843 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | PRINTS | Tyrosine kinase catalytic domain signature | 786 | 799 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | PRINTS | Tyrosine kinase catalytic domain signature | 891 | 913 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | PRINTS | Tyrosine kinase catalytic domain signature | 935 | 957 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | PRINTS | Tyrosine kinase catalytic domain signature | 872 | 882 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cam04g1097 | 1001 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 58 | 965 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 510 | 528 | - | - | |
Cam04g1097 | 1001 | FunFam | Serine/threonine-protein kinase isoform 1 | 703 | 790 | - | - | |
Cam04g1097 | 1001 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 147 | 350 | - | - | |
Cam04g1097 | 1001 | Gene3D | Phosphorylase Kinase; domain 1 | 705 | 789 | - | - | |
Cam04g1097 | 1001 | MobiDBLite | consensus disorder prediction | 368 | 447 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam04g1097 | Cam-Chr4:25112975 | Cam05g1951 | Cam-Chr5:28405675 | 1.00E-189 | dispersed | |
Cam04g1097 | Cam-Chr4:25112975 | Cam11g1485 | Cam-Chr11:27592838 | 4.10E-119 | transposed | |
Cam04g1097 | Cam-Chr4:25112975 | Cam10g1900 | Cam-Chr10:33075448 | 4.10E-119 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
85132 | PF07714 | PK_Tyr_Ser-Thr | 5.30E-67 | CL0016 | Cam | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam04g1097 | - | - | - | 0.0 |