Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g1098 ATGCTGCAATTCAATGGCGGAGAACTGAATCAGAACCGAGGAAGGCGACCGCTGGTTTTATACGGTTTGATACATATTGTAATCGAATTGACGTTAATCTGCTCTACCATGGATCGCCTCAATAAGGGTGATAAGCAATCAGAATTTTTCACAGAGTATGGAGAAGCAAGCCGATACCAAATTCAAGAAGTTGTTGGGAAAGGAAGCTATGGAGTTGTTGGTTCTGCAATTGATACCCAGACTGGTGAAAGAGTTGCCATCAAGAAAATTAATGATGTGTTTGAGCATGTATCTGATGCCATTCGTATCCTCAGAGAAATTAAGCTTCTTCGGATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCCTCACAACGAGAATTCAAAGATATATATCTTGTTTTTGAGTTGATGAAGTCTGATCTTCACCATGTAATTAAGGCAAATAATGATCTTTCTCCCAAGCAGCATAAGTTTTTTCTCTACCAGCTTCTTAGTGGCCTAAAATATATTCATGCGGCAAATGTCCTTCATCGAGATTTGAAGCCGAAAAACATACTTGCTAATGCTGACTGCAGACTGAAGATATGTGATTTTGGACTTGCTCGTGTATCTTTTAGTGATGCGCCATCTACTATTTTTTGGACAGATTATGTTGCAACTCGATGGTATCGTGCTCCCGAACTCTGTGGATCATTTTTCTCGAGATATACCCCTGCGATAGATATATGGAGTATCGGATGCATATTTGCGGAAATGCTTACGGGGAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGAACCTGAGGCCATAGCGAAGATTCGGAATGAGAAGGCAAGAAGGTACCTTGGAAACATGCGTAAAAAACCACCAGTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTGGCACTTTGTTTACTGGAACGTCTCCTGGCATTTGATCCCAAATGTCGTCTCACAGCTGCAGAGGCACTTGCTGATCCTTACTTCAACGGTATGGCGAAACCAGAACTTGAGCCTTCTATTCAACCAATTTCGAAACTTGAGTTTGAGTTTGAGAGGAGGAGGTTATCAAAAGATGATGTTAGAGAGTTGATATATGCGGAGATTTTAGAGTATCATCCCCAGATGCGTCAGGAGTGTCTACGTGATGGAGATCATCAATCTACCTTTATGTATCCAAGTGGCGTCGATCGATTTAAGCTTCAGTTTGCACATCTGGAAGAGCACCATGGTATAGGTGAAAGAAGAAGTCCACTTCAAAGGCAGAACATTTCTTTACCTCGGGAGCGGGTTAGTCCTACTGAGCAGAACAACACTGAGAATAAAACTGACTTTGAAAGGGGGAAAGATAAGAGTTCTTATCTCTTGAAAAGTGCTAGTATTAGTGCATCGAGGTGTGTTGGGGTAACACCAAAGGAGAAGTCTGAGGCGGAAGAAACGAGTACTGAAGTGAAAAATGAAGCAGTGGATGGCTTGTCTCAGAAGATCGCAGTCCTTCAGACTTGA 1569 41.62 MLQFNGGELNQNRGRRPLVLYGLIHIVIELTLICSTMDRLNKGDKQSEFFTEYGEASRYQIQEVVGKGSYGVVGSAIDTQTGERVAIKKINDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHHVIKANNDLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANADCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPEPEAIAKIRNEKARRYLGNMRKKPPVPFSRKFPNVDPLALCLLERLLAFDPKCRLTAAEALADPYFNGMAKPELEPSIQPISKLEFEFERRRLSKDDVRELIYAEILEYHPQMRQECLRDGDHQSTFMYPSGVDRFKLQFAHLEEHHGIGERRSPLQRQNISLPRERVSPTEQNNTENKTDFERGKDKSSYLLKSASISASRCVGVTPKEKSEAEETSTEVKNEAVDGLSQKIAVLQT 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25137837 25142582 + CaPI482276_04g010980.1 Cam04g1098 125176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g1098 522 FunFam Mitogen-activated protein kinase 145 373 - -
Cam04g1098 522 Pfam Protein kinase domain 59 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1098 522 CDD STKc_TDY_MAPK 58 395 - -
Cam04g1098 522 SMART serkin_6 59 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1098 522 FunFam Mitogen-activated protein kinase 47 152 - -
Cam04g1098 522 Gene3D Transferase(Phosphotransferase) domain 1 145 373 - -
Cam04g1098 522 SUPERFAMILY Protein kinase-like (PK-like) 55 357 IPR011009 -
Cam04g1098 522 MobiDBLite consensus disorder prediction 432 470 - -
Cam04g1098 522 MobiDBLite consensus disorder prediction 487 507 - -
Cam04g1098 522 ProSitePatterns MAP kinase signature. 94 197 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1098 522 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 56 391 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cam04g1098 522 ProSiteProfiles Protein kinase domain profile. 59 350 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1098 522 ProSitePatterns Protein kinases ATP-binding region signature. 65 89 IPR017441 GO:0005524(InterPro)
Cam04g1098 522 MobiDBLite consensus disorder prediction 492 506 - -
Cam04g1098 522 MobiDBLite consensus disorder prediction 439 460 - -
Cam04g1098 522 Gene3D Phosphorylase Kinase; domain 1 75 396 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1098 Cam-Chr4:25137837 Cam06g0579 Cam-Chr6:7831226 4.60E-186 dispersed
Cam04g1098 Cam-Chr4:25137837 Cam06g1581 Cam-Chr6:27299321 2.90E-209 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85133 PF00069 Pkinase 1.80E-67 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g1098 - - - 0.0