Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g1122 ATGAAAACTTCCGTCCCTCTCTTCCTCTTCTCGTTCTCCTTCACAATCGCGTGGTTTGATCTTCAGCTCTGTTTCAGCAATGACGCCAACGATGAATTTAAAGCTTGCGGTGTGTATTACAACTGGGGAAATTTGGTTAACATCTCATATCCGTTCTGGGGGAATGAGCGGAGGGAATTTTGCGGTCGGCGAGAATTTGAACTCAATTGCAAAGACAACAAAACCACAACGATTCAAATCAATTCTATCGAATATAACGTTCTGAAAATCAACCAATCGGATAATAGAATGACGATCGCAAGATCAGATCTCTTCGACGATTACTGTCCTAAAAATCAAATCGAAACGTCGACGTTGGATCATAGTCTGTTCAAGTATTCTTCGAACGATCTAAATCTGTGGGTGTGGTATGATTGCCCGCCGCAACAGGGGATTCCGGAGGAGTTCATGTTTTCGTGTGGTTGGAACGGGGAACGAAGTGGAAGAGCGAATTATGCTTTGGAGAAGAAGGATGCGATGAATTGGAGTAAAAATATTAGCGGGTGTAAGATGAACATGGAAGTGACGATTACGATGGAGGTATTGAAAGAAGGAGAAAAGAACAGAACAATGGTGGTGGAAAAGGGAATGAAAGAAGGGTTTGAAGTGGAATACGGGGATTTCTACGCCATAGCTTGCGACGGATGCAAGGAATCTGGTGGCGCGTGTGGTGGAAACGCGACTCAAGAGTTTCTGTGCATTTGTGGGAGTGGAGATGTACATCCTTACGTTTGCAAAGGAGCCCCCCCTCCTGGAGGACTATATGTACATGAATGGAAGCAGGCCACTCTAGGATTTCCATATAAAAATGGTAGAAGGAAGCCGGACATTATTATAGGAGCAACAACTTCAGCCGGCTTCATTTTAATAATCTCCATTATCATCTTCATCTACTGCAAGAGAAAAAGAATCTCAAACAAAGACAAAATCGAGGAAATTATTAAGAGATATTCCACACATACACCCAAGCGATACAGTTACTCCAAGTTAAAGAAGATCACGGATTCCTTCAAGAACAAACTTGGCCAAGGAGGATTTAGCATTGTGTACAAAGGAAAGCTACCAAGTGGATGTGATGTGGCTGTGAAACTTTTAAATGAATCCAGACAAGAAAATGGCCAAGATTTCATCAATGAAGTTGTTAGCATAGCCAAAACTTCGCACGTAAACATAGTCACCCTCTTAGGTTTCTGCTACGAGCAGAACAAGAGGGCTTTGGTTTATGAATATATGCCTAAGGGGTCATTGGATAAGTACATATCCCACAACAGACTGCAAGAAAATGATATGAAATTGGATTGGAACACACTCTACAATGTTGTTATTGGTGTGGCACGAGGCTTAGAGTACTTGCATCGCGGTTGCATCACAAGGATTTTGCACTTTGACATCAAACCACACAACATACTTTTGGATGATGACTTCTGCCCCAAAATCTCAGATTTTGGGCTTGCCAAGCAATGCAGGCCAAAAGAAACTCATGTATCGATGACAGGTGTGAAAGGGACGGTAGGATTCATTGCACCCGAAGTAATATTCAGGAACTTTGGTAAGGTTTCTCACAAGTCTGATGTTTATAGCTATGGAATGTTGGTTCTTGAAATGGTGGGAGCAAGAAAGAACCCCAATTCCAATGACAGTGATGGAGTGGAGCAGGGCAGTGAAGAGTACTTTCCTGATTGGATATATAACAATCTTACACAAAGTGAAATAGATGGAGGGTGTTGCTGGGGAAGCACAGAGGAAGAAGAAGAAATGACAAGAAAAATGATGATTGTGGGTTTACATTGTATTCAGACATTGCCTGACGACAGGCCGTCGATGACCGATGTGGTTGCTATGTTGGAAAGCAGTGTTGATGGCTTACAGATTCCACCAAAACCCAACTTGTTTGGACGTCCAACCATTGAGCATCCCCAACCTTCTTCTTCCTCTTCATCCAATTGA 1986 42.6 MKTSVPLFLFSFSFTIAWFDLQLCFSNDANDEFKACGVYYNWGNLVNISYPFWGNERREFCGRREFELNCKDNKTTTIQINSIEYNVLKINQSDNRMTIARSDLFDDYCPKNQIETSTLDHSLFKYSSNDLNLWVWYDCPPQQGIPEEFMFSCGWNGERSGRANYALEKKDAMNWSKNISGCKMNMEVTITMEVLKEGEKNRTMVVEKGMKEGFEVEYGDFYAIACDGCKESGGACGGNATQEFLCICGSGDVHPYVCKGAPPPGGLYVHEWKQATLGFPYKNGRRKPDIIIGATTSAGFILIISIIIFIYCKRKRISNKDKIEEIIKRYSTHTPKRYSYSKLKKITDSFKNKLGQGGFSIVYKGKLPSGCDVAVKLLNESRQENGQDFINEVVSIAKTSHVNIVTLLGFCYEQNKRALVYEYMPKGSLDKYISHNRLQENDMKLDWNTLYNVVIGVARGLEYLHRGCITRILHFDIKPHNILLDDDFCPKISDFGLAKQCRPKETHVSMTGVKGTVGFIAPEVIFRNFGKVSHKSDVYSYGMLVLEMVGARKNPNSNDSDGVEQGSEEYFPDWIYNNLTQSEIDGGCCWGSTEEEEEMTRKMMIVGLHCIQTLPDDRPSMTDVVAMLESSVDGLQIPPKPNLFGRPTIEHPQPSSSSSSN 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25314128 25320083 + CaPI482276_04g011220.1 Cam04g1122 125200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g1122 661 ProSiteProfiles Protein kinase domain profile. 348 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1122 661 MobiDBLite consensus disorder prediction 637 661 - -
Cam04g1122 661 Pfam Wall-associated receptor kinase galacturonan-binding 43 101 IPR025287 GO:0030247(InterPro)
Cam04g1122 661 Pfam Wall-associated receptor kinase C-terminal 169 250 IPR032872 -
Cam04g1122 661 Pfam Protein tyrosine and serine/threonine kinase 350 627 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g1122 661 FunFam serine/threonine-protein kinase PBS1-like 316 423 - -
Cam04g1122 661 PANTHER RUST RESISTANCE KINASE LR10-RELATED 213 647 IPR045874 GO:0004672(InterPro)
Cam04g1122 661 Gene3D Transferase(Phosphotransferase) domain 1 424 636 - -
Cam04g1122 661 FunFam PR5-like receptor kinase 424 640 - -
Cam04g1122 661 SMART serkin_6 348 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam04g1122 661 SUPERFAMILY Protein kinase-like (PK-like) 336 652 IPR011009 -
Cam04g1122 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam04g1122 661 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524(InterPro)
Cam04g1122 661 Gene3D Phosphorylase Kinase; domain 1 320 423 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1122 Cam-Chr4:25314128 Cam04g1124 Cam-Chr4:25325427 0.00E+00 dispersed
Cam04g1120 Cam-Chr4:25305884 Cam04g1122 Cam-Chr4:25314128 6.00E-116 proximal
Cam04g1122 Cam-Chr4:25314128 Cam04g1123 Cam-Chr4:25320974 5.60E-189 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85136 PF07714 PK_Tyr_Ser-Thr 3.00E-48 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g1122 - - - 0.0