Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam04g1169 ATGTCTTCTCTCCCATTTGCTTTCTTCTTCCTCCTCCTCTCCTTCCATTTCTTCTCGGCAATTAGCATCGATTTCCTCGTCGGCGATGAGGATGGCTGGGCAGTCCCTAAACCAAAAGAAGCTGACAAATACAACAAATGGGCTTCCCACAACAGATTCAATATCGATGACACTGTCCATTTCAAGTACGAGAAAGATTCGGTGATGATGGTGACAGAGGAAGAGTACAAACAGTGTTTTTCTTCAAAGCCTCTGTTTTATGAGAACAATGGTGATAGTGTTGTGAAACTTGATAGAGCCGGTTTGTTCTATTTCATTAGTGGAGTTTCAGGGCATTGTCAGAAAGGCCAAAGAATGATAATCAAAGTGTTGGAACCTATAAATCCTCCTCACCCACCAACTGCTCCACCAAATAACAAGAATGCTGCAGCAGCCTCTTCTAATTTGCTCTCTGTTTCATCTTCAATCTTGGGAGTGTTCTTGATGTTGTTCTTTGCTCTGTTTCTGTCCATTTGA 516 42.25 MSSLPFAFFFLLLSFHFFSAISIDFLVGDEDGWAVPKPKEADKYNKWASHNRFNIDDTVHFKYEKDSVMMVTEEEYKQCFSSKPLFYENNGDSVVKLDRAGLFYFISGVSGHCQKGQRMIIKVLEPINPPHPPTAPPNNKNAAAASSNLLSVSSSILGVFLMLFFALFLSI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 25755348 25755970 + CaPI482276_04g011690.1 Cam04g1169 125247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam04g1169 171 Gene3D - 22 126 IPR008972 -
Cam04g1169 171 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055(InterPro)
Cam04g1169 171 PANTHER BLUE COPPER PROTEIN 16 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cam04g1169 171 Pfam Plastocyanin-like domain 40 117 IPR003245 GO:0009055(InterPro)
Cam04g1169 171 CDD OsENODL1_like 24 124 IPR041846 -
Cam04g1169 171 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Cam04g1169 171 FunFam Early nodulin-like protein 1 22 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g1169 Cam-Chr4:25755348 Cam09g2002 Cam-Chr9:34655146 4.30E-32 dispersed
Cam04g1169 Cam-Chr4:25755348 Cam10g0519 Cam-Chr10:7691155 2.00E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam04g1169 - - - 0.0