Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam04g1198 | ATGTCTTTAGAACAAGAATTTCTGTTCCTTATTCCCTCAACAATGGCCAATAATCTCAATATCTTTCTTTGTTTTCTTCTCTTCGTGGCTATTTTCACCCTTTGCCTCACCCCCGGTGGTCTAGCTTGGGCTCTAATTTCAAAGCCAAGAAACAAACCTATCATTCCTGGCCCTTGTGGGACTCCTATTTTAGGTCAAGTTTCTGCCTTTACCACTTCTTTAACTCATAAAGTCCTTGCTAAGCTTGCTCATACCTTAAATGCCAAATCTTTAATGTCATTCTCAATTGGGTTCACTCGTTTTGTGATTTCTAGCAATCCCATCACAGCCAAAGAGCTTTTGAATAGCTCAGCTTTTGCTGATCGTCCAATTAAGGAATCAGCATATGAGCTTTTGTTTCATAGAGCAATGGGGTTTGCTCCTTATGGGGAATATTGGAGGAATCTTAGGAGAATTTCAGCCACTCATTTGTTTAGTCCTAAAAGGGTTTGTGGATTTGGGGTTTTGAGGGAGAGAATTGGAGTTAAAATGATGGAGGAAATTAAGGGTTTGATGGAGAAGAATGGGGAAGTTGAAGTTAGGAAAATCTTGCATTTTGGGTCATTGAGTAATGTTATGGGGAGTGTGTTTGGGAAAAGTGTTGAGTTTGGTGATAGTGAGATTGAGGGATTGGTGAGTGAAGGGTATGATTTGCTTGGGAGTTTTAATTGGAGTGATCATTTTCCTCTTTTGGGTTGGTTGGATTTGCAAGGTGTGAGAAAAAGGTGTAGAGTTTTGGTGGGGAAAGTTAATGTTTTTGTTGGAAAAATCATTGAGGAGCATAGAATGAAAAGGAGGGTTGTTAGTAAAGGAAATAATAACCCTAATGATAATGAAGATGGAGATTTTGTTGATGTGTTGCTTGATTTGCAAAAGGAAAACAAACTCACTGACTCTGATATGATTGCTGTGTTATGGGAAATGATCTTCCGAGGAACAGACACCGTGGCAATTCTCCTAGAATGGATTTTAGCAAGAATGGTTCTTCATCCCGATATCCAAGCCAAACTCCAATCCGAAATCGACCGAGTCGTTGCCAAAACCGGCCGAAACATCTCGGATTCAGACCTCCCAAATCTCCCTTATCTCCATGCAGTCGTCAAAGAGACTCTAAGAATGCACCCTCCGGGCCCACTCCTCTCCTGGGCCCGCCTCGCCATTCACGACACCCACGTGGCCGGCCACTTCATTCCCGCCGGCACGACGGCGATGGTTAACATGTGGGCCATAACCCACGACGACCAAATCTGGACCGACCCGACTACATACGACCCGGATCGGTTCATTAAAGATGACGTGGCGATAATGGGGTCGGATTTGCGGCTCGCGCCTTTCGGGTCCGGAAGAAGGGTTTGTCCTGGTAAAGCCATGGGGCTAGCCACGGTCGAGCTTTGGCTGGCTCAGTTGGTTCATAGGTTCGAATGGGTTCAGGCTGGTGGCTGGGAAAATGGAGGAGTTGATCTGTCTGAGTGTTTGAAGCTGTCTCTGGAGATGAAACACCCTTTGATTTGTAGGGCTGTTCCTAGGATTGTGGGGCTTGAGTCTCACCCATGA | 1593 | 44.88 | MSLEQEFLFLIPSTMANNLNIFLCFLLFVAIFTLCLTPGGLAWALISKPRNKPIIPGPCGTPILGQVSAFTTSLTHKVLAKLAHTLNAKSLMSFSIGFTRFVISSNPITAKELLNSSAFADRPIKESAYELLFHRAMGFAPYGEYWRNLRRISATHLFSPKRVCGFGVLRERIGVKMMEEIKGLMEKNGEVEVRKILHFGSLSNVMGSVFGKSVEFGDSEIEGLVSEGYDLLGSFNWSDHFPLLGWLDLQGVRKRCRVLVGKVNVFVGKIIEEHRMKRRVVSKGNNNPNDNEDGDFVDVLLDLQKENKLTDSDMIAVLWEMIFRGTDTVAILLEWILARMVLHPDIQAKLQSEIDRVVAKTGRNISDSDLPNLPYLHAVVKETLRMHPPGPLLSWARLAIHDTHVAGHFIPAGTTAMVNMWAITHDDQIWTDPTTYDPDRFIKDDVAIMGSDLRLAPFGSGRRVCPGKAMGLATVELWLAQLVHRFEWVQAGGWENGGVDLSECLKLSLEMKHPLICRAVPRIVGLESHP | 530 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 26066783 | 26068803 | - | CaPI482276_04g011980.1 | Cam04g1198 | 125276 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam04g1198 | 530 | PANTHER | CYTOCHROME P450 78A7-RELATED | 18 | 519 | IPR051996 | - | |
| Cam04g1198 | 530 | FunFam | Cytochrome P450 78A5 | 47 | 522 | - | - | |
| Cam04g1198 | 530 | Gene3D | Cytochrome P450 | 44 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | SUPERFAMILY | Cytochrome P450 | 55 | 522 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | E-class P450 group I signature | 465 | 488 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | E-class P450 group I signature | 455 | 465 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | E-class P450 group I signature | 419 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | E-class P450 group I signature | 333 | 359 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | E-class P450 group I signature | 313 | 330 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 458 | 467 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cam04g1198 | 530 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | P450 superfamily signature | 456 | 465 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | P450 superfamily signature | 465 | 476 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | PRINTS | P450 superfamily signature | 324 | 341 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | Pfam | Cytochrome P450 | 56 | 489 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cam04g1198 | 530 | CDD | CYP78 | 87 | 515 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam04g1198 | Cam-Chr4:26066783 | Cam11g1399 | Cam-Chr11:26648301 | 2.00E-152 | dispersed | |
| Cam11g1345 | Cam-Chr11:26151278 | Cam04g1198 | Cam-Chr4:26066783 | 4.10E-10 | dispersed | |
| Cam02g0097 | Cam-Chr2:2103885 | Cam04g1198 | Cam-Chr4:26066783 | 4.40E-136 | transposed | |
| Cam04g1198 | Cam-Chr4:26066783 | Cam08g1500 | Cam-Chr8:21210568 | 5.50E-195 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam04g1198 | K20619 | - | csv:101203458 | 954.896 |