Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cam04g1218 | ATGTTGTTTCAGATTCCCCGACTGACCAGCTCCCTCAGGGAGCCATTCGATGTCGACCAGGCGTATCTCCATCGCAAGCTCCTTCTTCAAAATCACAAACCGTCCCACTCCATAGCTTCATCGGGCGAGTCAGAACTAGCGCGGAAGATAGTGTATCAATGGGATGAAGCATCTTTTGAAGTTCGACAAGCCTATAAGCAGTTCATTGCGGGAGTTGTTGGGTTGGTGGACAGAGAAGTACCATCCGAGGAGCTTGGTGAGGTAGCACTGACTATTTATTGCCTTTTTGGCGAGCAAAAAGAAGAGAATGATCTCGACTATATTGCTAAAAACATGGAAGAATTGCAAAAGCTTATTGGCAATACAGTTTCAGATGCTAGGCTGCAGAAAGTTATTTCTCTAGCTCAGAAACTATTTATTTTGCAGCCAAGGGATCATGCAACTGCATTGCTAGCAGAGAAGCATGTTAACAAGGGTGACTCCTCTGTAGAGTTTGGCGCTGATCTTGCTTTTAGAGAACCTACTAGGTTTATGGTGGATGCGTCTCTGGAAAATTCAGATTTACTGGGCAAGGATATTACTACACCTACATTTTATGACAGACAACATGTGCAAGACCATTCCATGAACTTTGATCTCTCTAATGAAAGAGGAAAGTTAAATTTGAGTTGGTTGAGGGATGCATGTGACGAGATAACAAGAAAAAGTACCTCACAACTCTCCCTTGATGAGCTTGCAATGGCCATTTGCCGAGTCCTTCATTCAGAAAAACCTGGCGAGGAGATAGCTGCAGATCTATTGGATCTTGTTGGTGATGGAGCATTTGAGTTTGTTCAAGATCTTATTTCACACCGAAGGGAACTTGTTGATGATATTCATCATGGGTTAACAATAATAAAATCTGAAAAACCAAATTCAAGCTCACAATCACGAATGCCTAGCTATGGAACTCAGGTTACTGTTCAAACAGAATCAGAGAAACAAATTGATAAGCTTCGACGTAAGGAGGAAAAGAGAAATAAACGAGGAATTGAATATGATTCTGAAAGTGATTTCTCTGCTGTAAGCTTTTCTTCTCTAGTTCAAGCAAGCCAAAGGAAAAGTCCATTTGACGATCTTATTGGTTCTGGTGAGGGCTCTAACTCCCTTACAGTTAATGCACTTCCTCAAGGAACACAAAGGAAGCATTTTAAGGGATATGAGGAGGTAATTATCCCTCCAATCCCAGCAGCACAAATGAAACCTGGTGAAAAGCTGATTGAAATAAAGGAGTTGGATGATTTTGCTCAAGCTGCTTTTCGCGGATTTAAATACTTAAACCGCATACAGAGTCGCATTTTTGACACTGTTTATAACACCAATGAGAATATACTAGTCTGTGCTCCAACAGGGGCTGGGAAAACTAATATAGCGATGATCTCCATTCTCCACGAGATTTCACAGCACTTCAAGGATGGATATTTGCATAAAGATGAATTTAAGATAGTTTATGTTGCTCCTATGAAGGCATTGGCTGCAGAGGTCACATCTACTTTTAGCCATCGTTTATCACCCTTGAATGTTACTGTAAGAGAACTAACTGGAGACATGCAACTTTCAAAGAATGAACTTGAAGAAACTCAGATGATAGTGACAACACCTGAGAAATGGGATGTCATTACTCGAAAAAGCAGTGACATGTCACTCTCGATGTTAGTCAAACTCTTAATTATTGACGAGGTGCATCTTCTAAATGATGACCGAGGGCCTGTAATTGAGGCATTAGTTGCACGAACTCTTCGTCAGGTGGAGTCAACACAAACAATGATACGGATTGTTGGCCTTTCAGCCACCCTCCCTAATTACTTAGAGGTTGCACAGTTTCTTAGAGTGAATCCAGGAACAGGACTTTTCTTCTTTGATTCTAGCTACCGTCCTGTGCCTCTTGCACAACAATATATTGGTATCAGCGAGCATAACTTTGCAGCTCGCAATGAATTGTTAAATGAAATATGCTATAAGAAGGTTGTTGATTCATTAAAGCATGGGCATCAAGCAATGGTGTTTGTTCATTCTCGAAAGGACACAGCAAAGACAGCAGAGAAACTGGTCGAAATTGGTCGGAAGTATGATGATCTTGAGGTATTTAAGAATGATGCACACCCGCAATTTGGTATTATCAAGAAAGAAGTCATCAAATCCAGGAATAAAGATCTAGTAGAACTTTTTAATTTTGGGATTGGTGTACATCATGCTGGAATGCTACGTTCTGATAGAGGTTTAACCGAAAGGCTTTTCTCTGATGGACTGTTGAAGGTTCTTGTTTGTACAGCCACCTTAGCATGGGGTGTAAATCTGCCTGCTCATACGGTTGTTATAAAGGGCACCCAATTATATGATCCAAAAGCTGGTGGATGGCGAGATTTGGGTATGCTTGATGTCATGCAGATTTTTGGACGAGCTGGGAGACCTCAGTTTGACAAAAGTGGTGAAGGCATCATAATTACATCTCACGATAAACTTGCCCATTATTTGCGATTGCTTACAAGTCAGCTCCCTATAGAGAGTCAGTTTATTGGCTCTTTGAAAGATAATTTGAATGCGGAGGTTGCACTGGGTACTGTAACGAATGTGAAGGAAGCTTGTGCCTGGCTTGGATATACATATCTATTTATAAGGATGAGACTAAATCCGCTGGCATATGGCATTGGATGGGATGAGGTCATGGCCGATCCATCTTTGAGTTCAAAGCAAAGAGCTCTCATAACAGATGCTGCACGTGCACTTGACAAATCAAAGATGATGCGTTTTGATGAAAAAAGTGGCAACTTTTATTGTACAGAGCTCGGCCGCATTGCCAGCCACTTCTATATTCAGTATTCCAGTGTTGAAACATATAATGAGATGTTGAGACGTCATATGAATGACAGTGAGATTATTGACATGGTCGCTCATTCTTCTGAGTTTGAAAATATTGTTGTTCGAGATGAGGAGCAGAGTGAGCTGGAGATGTCAGTACGAACATCATGTCCCTTGGAAGTTAAAGGTGGCCCATCCAATAAACATGGAAAAATTTCCATCCTTATTCAGTTGTACATTTCCAGAGGTTCCATCGATACCTTCTCATTAGTCTCCGATGCTGCTTATATAAGTGCTAGCTTGGCTCGTATTATGCGAGCTCTATTTGAAATATGTTTGAGAAGGGGTTGGTGCGAAATGACTTTGTTCATGTTGGAATACTGCAAAGCTGTTGATCGTCGAATATGGCCACACCAGCATCCTCTAAGACAATTTGACAAGGATCTTTCTTCAGATATATTGCGCAAGCTTGAGGAGCGAGAGGCTGATTTGGATCGTCTACAGGAGATGCAGGAAAAAGACATAGGAGCATTGATCCGTTATGCACCTGGTGGAAGATTGGTTAAGCAGTATTTAGGATATTTTCCACTAATCCAGTTATCAGCAACTGTCAGCCCAATAACAAGAACAGTCCTAAAGGTTGAGGTGGTCATAACAGCCGACTTCATATGGAAAGATCGTTTTCATGGAGGTTCACAACGCTGGTGGATACTAGTTGAGGATAACGAGAATGACCATATTTATCACTCCGAGCTTTTCACTCTGGCAAAGAAGAAGGCTAGAGAGCCTCAAAGGCTTTCCTTCACAGTCCCAATATTTGAGCCACATCCTCCTCAATATTATATTCATGCCGTTTCTGACTCCTGGCTGCAAGCAGAAGCATTTTACACCATATCTTTCCAAAATTTAGCACTGCCGGAGGCCCGTACGTTGCACACTGAGCTCCTAGACTTGAAACCTCTTCCAATAACTGCTCTTGGTAACAGAAGTTACGAATCCCTGTATAAATTTTCACATTTTAATCCAATACAAACACAGATTTTTCATGTGTTGTATCATACAGATGATAACATTCTGTTGGGTGCTCCCACTGGGAGTGGAAAAACCATATCTGCTGAACTTGCTATGCTTCGTCTCTTCAATACTCAGCCTGATATGAAGGTTGTCTACATAGCACCTTTGAAGGCCATTGTTCGTGAAAGAATGAATGACTGGAAAAATTGTCTTGTTTCTCGGCTCGGCAAAAAAATGGTTGAAATGACGGGAGATTATACCCCTGATTTGATGGCACTTTTGTCAGCAGATATTATAATATCAACCCCCGAAAAGTGGGATGGTATTAGTAGAAATTGGCATAGTCGAAGCTATGTTACAAAGGTTGGACTAATGATTCTGGATGAGATCCATTTATTGGGAGCAGATCGTGGTCCCATTCTTGAGGTTATTGTTTCAAGGATGAGGTATATATCATCACAGACTGAGCGAAAAGTTAGATTTGTAGGCCTTTCAACTGCTTTAGCGAATGCAAGTGATTTGGGTGACTGGCTAGGTGTTGGAGAAAATGGACTTTTCAATTTCAAACCAAGTGTAAGGCCAGTGCCTCTTGAAGTTCATATTCAGGGATATCCTGGAAAGTTCTACTGCCCTAGGATGAACAGTATGAATAAACCAACTTATGCTGCCATCTGCACCCATTCACCAACCAAGCCAGTTCTTATATTCGTCTCATCTCGTCGCCAGACAAGACTCACGGCATTGGATCTTATTCAGTTTGCAGCTTCAGATGAGCATCCAAGGCAATTTCTTAATATGGCCGAAGACGAGCTTCAGATGATCCTTTGTCAAGTCATTGATCAAAATCTCAGGCACACTTTGCAGTTTGGTATTGGGCTACACCATGCAGGTCTAAATGATGGGGACAGGTCTATGGTTGAGGAACTGTTTGCCAACAACAAAATTCAGGTATTGGTTTGTACTAGCACATTGGCTTGGGGTGTGAACCTTCCTGCACATCTAGTTATTATCAAGGGAACAGAATATTATGATGGAAAATCAAAGAGATACGTTGATTTTCCAATCACAGATATTCTGCAAATGATGGGTCGTGCAGGTCGACCACAGTATGATCAACATGGAAAAGCAGTTATTCTTGTTCATGAACCCAAAAAGAGCTTTTATAAGAAGTTTTTGTACGAACCATTCCCAGTTGAGAGTAGTCTGAAGGAGCAGTTGCATGACCATATCAATGCTGAGATAGTTTCGGGCACCATTTGTCATAAAGAGGATGCAGTACACTATCTTAGCTGGACATATTTGTTTCGTAGGCTGATGGTAAATCCTGCTTACTATGGGTTGGATAGCATGGAACCTGAAATTCTAAGTTCGTACTTATCTAGGTTAGTACAAAGCACATTTGAGGATCTCGAGGATAGTGGATGCATAAAGATGGATGAAGACAGAGTGGAGCCAATGATGCTGGGTTCAATAGCATCTCAGTATTACCTCAGCTACATTACTTTATCAATGTTTGGCTCAAATATAGGTCCAGATACGTCACTTGAAGTATTTTTGCATATCCTTTCCGCCGCTTCTGAATATGATGAACTTCCTGTGCGGCATAATGAGGAAAATTACAATGCTGCTCTATCTGAGAGGGTTCGATATAAGGTGGACAAAGATCGACTTGATGATCCACATGTGAAGGCAAATTTACTTTTTCAGGCACACTTTTCTCAGTTGGAATTACCAATCAGTGACTACATTACCGACTTAAAGTCAGTGTTGGATCAGAGTATACGCATTATTCAGGCCATGATTGATATATGTGCCAACAGTGGATGGCTATCAAGCTCGATTACATGCATGCGTCTATTGCAAATGGTCATGCAGGGCTTGTGGTTTGATGTGGATTCGGCATTATGGATGCTACCATGCATGAATGATGACCTTGCAAATTCACTTAAAAAATCGGGATATCTAACTCTGCAGCAACTGTTGAATCTTCCCAAGACAGCTTTGCAAAATTTGATTGGAAATTTTCCTGCTTCAAAATTAACTCAGGATTTGCAGATGTTTCCTCGTGTCCAAATGAAGATAAAACTTCAAAGGAAGGACGACGACGTTGGAAAAGCTCCCTCTCTTAACATTAGATTGGAGAAGATAAGTTCGAGGAAAAACAGAACCAGGGCATATGCACCACGGTTTCCCAAGATGAAAGATGAAGCATGGTGGCTTGTACTTGGTAACACCTCTACGTCGGAACTGTATGCTTTAAAGAGAGTTTCTTTCGCTGATCGCTTGGTCACAACCATGCAGTTGCCTCCAAAAAGAAATGACTTCCAGGAAATGAAATTGATTTTGGTCTCAGATTGTTATCTTGGTTATGAGCAAGAATACTCCATTAAAGAACTGATAAGTGGAAGCAGTTGA | 6267 | 41.22 | MLFQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPSHSIASSGESELARKIVYQWDEASFEVRQAYKQFIAGVVGLVDREVPSEELGEVALTIYCLFGEQKEENDLDYIAKNMEELQKLIGNTVSDARLQKVISLAQKLFILQPRDHATALLAEKHVNKGDSSVEFGADLAFREPTRFMVDASLENSDLLGKDITTPTFYDRQHVQDHSMNFDLSNERGKLNLSWLRDACDEITRKSTSQLSLDELAMAICRVLHSEKPGEEIAADLLDLVGDGAFEFVQDLISHRRELVDDIHHGLTIIKSEKPNSSSQSRMPSYGTQVTVQTESEKQIDKLRRKEEKRNKRGIEYDSESDFSAVSFSSLVQASQRKSPFDDLIGSGEGSNSLTVNALPQGTQRKHFKGYEEVIIPPIPAAQMKPGEKLIEIKELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEISQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEETQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQTMIRIVGLSATLPNYLEVAQFLRVNPGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNELLNEICYKKVVDSLKHGHQAMVFVHSRKDTAKTAEKLVEIGRKYDDLEVFKNDAHPQFGIIKKEVIKSRNKDLVELFNFGIGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRLLTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDEVMADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYNEMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISILIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRRIWPHQHPLRQFDKDLSSDILRKLEEREADLDRLQEMQEKDIGALIRYAPGGRLVKQYLGYFPLIQLSATVSPITRTVLKVEVVITADFIWKDRFHGGSQRWWILVEDNENDHIYHSELFTLAKKKAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEARTLHTELLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHTDDNILLGAPTGSGKTISAELAMLRLFNTQPDMKVVYIAPLKAIVRERMNDWKNCLVSRLGKKMVEMTGDYTPDLMALLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMAEDELQMILCQVIDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVIIKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEQLHDHINAEIVSGTICHKEDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILSSYLSRLVQSTFEDLEDSGCIKMDEDRVEPMMLGSIASQYYLSYITLSMFGSNIGPDTSLEVFLHILSAASEYDELPVRHNEENYNAALSERVRYKVDKDRLDDPHVKANLLFQAHFSQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALWMLPCMNDDLANSLKKSGYLTLQQLLNLPKTALQNLIGNFPASKLTQDLQMFPRVQMKIKLQRKDDDVGKAPSLNIRLEKISSRKNRTRAYAPRFPKMKDEAWWLVLGNTSTSELYALKRVSFADRLVTTMQLPPKRNDFQEMKLILVSDCYLGYEQEYSIKELISGSS | 2088 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 26199124 | 26235874 | + | CaPI482276_04g012180.1 | Cam04g1218 | 125296 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cam04g1218 | 2088 | SMART | ultradead3 | 435 | 646 | IPR014001 | - | |
| Cam04g1218 | 2088 | SMART | ultradead3 | 1282 | 1486 | IPR014001 | - | |
| Cam04g1218 | 2088 | Pfam | DEAD/DEAH box helicase | 1287 | 1453 | IPR011545 | GO:0003676(InterPro)|GO:0005524(InterPro) | |
| Cam04g1218 | 2088 | Gene3D | - | 1777 | 1913 | - | - | |
| Cam04g1218 | 2088 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1295 | 1470 | IPR014001 | - | |
| Cam04g1218 | 2088 | FunFam | U5 small nuclear ribonucleoprotein helicase | 940 | 1082 | - | - | |
| Cam04g1218 | 2088 | MobiDBLite | consensus disorder prediction | 300 | 325 | - | - | |
| Cam04g1218 | 2088 | FunFam | Activating signal cointegrator 1 complex subunit | 1250 | 1477 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | Sec63 N-terminal domain-like | 967 | 1142 | - | - | |
| Cam04g1218 | 2088 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1502 | 1710 | IPR001650 | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | E set domains | 1956 | 2081 | IPR014756 | - | |
| Cam04g1218 | 2088 | Pfam | Helicase conserved C-terminal domain | 1560 | 1652 | IPR001650 | - | |
| Cam04g1218 | 2088 | Pfam | Helicase conserved C-terminal domain | 731 | 817 | IPR001650 | - | |
| Cam04g1218 | 2088 | FunFam | U5 small nuclear ribonucleoprotein helicase | 848 | 939 | - | - | |
| Cam04g1218 | 2088 | Gene3D | - | 1250 | 1477 | IPR027417 | - | |
| Cam04g1218 | 2088 | SMART | helicmild6 | 726 | 818 | IPR001650 | - | |
| Cam04g1218 | 2088 | SMART | helicmild6 | 1561 | 1653 | IPR001650 | - | |
| Cam04g1218 | 2088 | FunFam | RNA helicase, activating signal cointegrator 1 | 1141 | 1249 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | Winged helix DNA-binding domain | 1681 | 1781 | IPR036390 | - | |
| Cam04g1218 | 2088 | Gene3D | C2 domain | 1970 | 2084 | IPR035892 | - | |
| Cam04g1218 | 2088 | Pfam | Sec63 Brl domain | 939 | 1245 | IPR004179 | - | |
| Cam04g1218 | 2088 | Gene3D | - | 848 | 938 | IPR036388 | - | |
| Cam04g1218 | 2088 | SMART | Sec63_2 | 1769 | 2082 | IPR004179 | - | |
| Cam04g1218 | 2088 | SMART | Sec63_2 | 939 | 1246 | IPR004179 | - | |
| Cam04g1218 | 2088 | PIRSF | BRR2 | 18 | 2087 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | Winged helix DNA-binding domain | 846 | 951 | IPR036390 | - | |
| Cam04g1218 | 2088 | FunFam | RNA helicase, activating signal cointegrator 1 | 427 | 638 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 633 | 846 | IPR027417 | - | |
| Cam04g1218 | 2088 | Gene3D | - | 427 | 638 | IPR027417 | - | |
| Cam04g1218 | 2088 | Pfam | DEAD/DEAH box helicase | 440 | 614 | IPR011545 | GO:0003676(InterPro)|GO:0005524(InterPro) | |
| Cam04g1218 | 2088 | Gene3D | - | 940 | 1082 | - | - | |
| Cam04g1218 | 2088 | CDD | SF2_C_Ski2 | 1477 | 1665 | - | - | |
| Cam04g1218 | 2088 | Gene3D | - | 1478 | 1682 | IPR027417 | - | |
| Cam04g1218 | 2088 | FunFam | Activating signal cointegrator 1 complex subunit 3 | 1776 | 1912 | - | - | |
| Cam04g1218 | 2088 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 448 | 630 | IPR014001 | - | |
| Cam04g1218 | 2088 | Gene3D | - | 1084 | 1138 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1472 | 1681 | IPR027417 | - | |
| Cam04g1218 | 2088 | Gene3D | - | 1683 | 1776 | IPR036388 | - | |
| Cam04g1218 | 2088 | Gene3D | C2 domain | 1141 | 1249 | IPR035892 | - | |
| Cam04g1218 | 2088 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 665 | 863 | IPR001650 | - | |
| Cam04g1218 | 2088 | Gene3D | - | 639 | 841 | IPR027417 | - | |
| Cam04g1218 | 2088 | MobiDBLite | consensus disorder prediction | 326 | 342 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | Sec63 N-terminal domain-like | 1802 | 1959 | - | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 389 | 623 | IPR027417 | - | |
| Cam04g1218 | 2088 | CDD | SF2_C_Ski2 | 638 | 829 | - | - | |
| Cam04g1218 | 2088 | FunFam | U5 small nuclear ribonucleoprotein helicase | 1083 | 1139 | - | - | |
| Cam04g1218 | 2088 | FunFam | U5 small nuclear ribonucleoprotein helicase | 639 | 841 | - | - | |
| Cam04g1218 | 2088 | Coils | Coil | 1096 | 1120 | - | - | |
| Cam04g1218 | 2088 | FunFam | U5 small nuclear ribonucleoprotein helicase | 1683 | 1776 | - | - | |
| Cam04g1218 | 2088 | CDD | DEXHc_ASCC3_2 | 1285 | 1473 | - | - | |
| Cam04g1218 | 2088 | PANTHER | DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED | 220 | 1179 | IPR050474 | - | |
| Cam04g1218 | 2088 | CDD | DEXHc_ASCC3_1 | 439 | 634 | - | - | |
| Cam04g1218 | 2088 | FunFam | DExH-box ATP-dependent RNA helicase DExH14 | 1972 | 2082 | - | - | |
| Cam04g1218 | 2088 | FunFam | Activating signal cointegrator 1 complex subunit 3 | 1478 | 1682 | - | - | |
| Cam04g1218 | 2088 | SMART | AAA_5 | 1300 | 1450 | IPR003593 | GO:0016887(InterPro) | |
| Cam04g1218 | 2088 | SMART | AAA_5 | 453 | 770 | IPR003593 | GO:0016887(InterPro) | |
| Cam04g1218 | 2088 | Pfam | Sec63 Brl domain | 1769 | 2080 | IPR004179 | - | |
| Cam04g1218 | 2088 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1173 | 1470 | IPR027417 | - | |
| Cam04g1218 | 2088 | MobiDBLite | consensus disorder prediction | 300 | 342 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cam04g1218 | K18663 | - | - | csv:101222457 | 4021.85 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cam04g1218 | Cam-Chr4:26199124 | Cam05g0791 | Cam-Chr5:6941217 | 0.00E+00 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi17g647 | . | Blo16g00171 | . | . | . | Bpe13g00309 | Bma06g00154 | . | Cmo13g01125 | . | . | . | . | . | . | Cpe20g00069 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone2ag0807 | . | . | . | Lsi02g00115 | Csa01g00593 | Chy12g01505 | Cme12g01949 | . | . | Bda11g01720 | . | . | . | . | . | . | . | . | Cma13g01078 | . | Car13g00915 | . | . | . | Bhi08g01095 | . | . | . | . | . | . | Cla04g01159 | Cam04g1218 | Cec01g1729 | Cco01g1775 | Clacu04g1245 | Cmu04g1224 | Cre01g1520 | . | . | . | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0009577 | 1 | 3 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 32 |