Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0077 ATGGGCGTAGTATCACATCAACACCTCGTAACATCCCAACTCCTCCAGTGTTTTTCATCAAAGCTTCTTATGAATTCTTGCAAACCAATATTGGGCTTCCTTGGTGTCCCCCTCCCGAAGTCTATATGTGCCTTCAATTTGCAAACCAACATTGGGCTTCCTTGGTGTCCCCTTCCCGAAGTCTGGTTGTACTCTATTGCAAGGCTCACCGTTGCCTTATCAATCTCCTTCCTGCTTCATTCGTCGATCCCTCTTTTATTCACAATCCTGATTCGATTTTCATTTCCCTTTTCGTCTTTTTTCCCCATTCCGGATCCGAAGCAATTTCTCCAGGATTCAGGGGAATTTGTTTATGGTATGGAAACAGGGCCTGCCACTTCTAACCATTCATCGTCATTGCCCTTTGTTATGGAATGCCGATTTCGCTTGCAATCGGCATTCGATTCTTTTTGCATTGCGTCCGAAGCCTTTTCCGAGCATCGTCGTTGTCGAATTCCGATCTGGCGACATGCTTTTTCTAGCAAAAATGAGTGCCTAGCTGATCCCATTAGTGCGTTATTTGGAAGTATGGAGTCTCCTGATACTGCTGCTGAGAAAGATCCTACCGGTCGATACGTTCGGTACGATGAAATCCTGGGAAGGGGCGCTTTCAAGACAGTTTACAAGGCATTCGACGAAGTGGATGGAATTGAAGTTGCCTGGAACCAAGTTAGGATTGATGGTTTCTTGCAGTCACCTGAGGATTTAGAAAAGTTGTACTCCGAAGTACATCTACTTAAATCATTAAAACATGAGAATATTATCAAGTTCTACAATTCTTGGGTGGATGATAAGAAGAAAACAGTCAACATGATCACTGAGCTCTTCACATCTGGGAGTTTGAGGCAATACCGTAAAAAGCATAAAAATGTTGATATGAAGGCCATAAAGAACTGGGCGCGACAGGTTCTCCGAGGGTTGGTCTATCTTCACAGTCATGATCCCCCCATTATTCATAGAGATTTGAAAGGTGATAACATTTTTATTAATGGAAATCATGGAGAAGTTAAGATTGGAGATCTTGGACTAGCGATCGTTATGCAGCAGCCTACTGCTCGAAGTGTAATTGGAACTCCTGAGTTCATGGCTCCTGAGCTTTATGAAGAGGAGTACAATGAGCTTGTTGATGTATATTCTTTTGGGATGTGCATGCTGGAGATGGTTACCTTTGAGTATCCATATAATGAATGTAAAAATCCAGCTCAGATCTTTAGGAAAGTTACATCTGGTATTAAGCCTGCTTCCCTTGCTAAGGTGAGTGATCCACAGACTATGGAGTTCATCAATAAATGTTTGGTTCCAGCGCATGAGAGGTTGTCTGCAAAAGAGCTTCTTAAAGATTCATTCCTTCAAGTTGAGAACCCAAAGGAATCAGCGCGCAATCCCCTACAGCTACCTATCCAGGTTCCTAAATCAATGAATTTGCCAAAGAGTGGACCTATCTCCATGGACATTGACATTGACCACAAACAACATTCTTTAAGCACTTATGCTGAAAGCAATAGTGGGAGTCCACACTTTCCAGTTGTGGAGTTCCAGACAATGAATAAGAACAACGAGTTCAGGTTACGTGGAAATAAGAATGATGAAAACTCCGTGGCATTAACCTTGCGTATCGCAGACTCAAATGGTCGAGTGAGGAATATACATTTTACATTTTATCTCGATTCTGATACTGCACTATCAGTAGCAGCTGAAATGGCTGAACAATTGGAGTTGATAAATCATGATGTGGATTTCATAGCTGAATTTATTGATTTTTTGATAACAAAGCTTATACCTGGTTGGAAGCCCTTGTCTGTTAATTCCTCAAATGGAGAATCGAGTCTTTGCGGCGGTCCCCCCATCCTCAAAAGTGTGAAATCATCTATTGGATCTCCATGGGGTTCAATGTCAACTGGGATTCATGATGGGTTGGTCGAGCAAGACATTTCCTCTGTGTTAGTGTGTAGTACTCAAAAGGATTGTCTGCAATCTGAGCGAGATGGCTGGGCTGACGATATTCCCAGTAGTCACATTTTTGATACTTGCCCTTCTTCTCCCAGTTTGGCTAATTTTGAGGACTTGAATTCACACGCTTCATTTGCGTCAGAGTTACTGGTCGAAGATTGCTCTACCAAAAGTTCTAAGGTGTTTGATTGTTCCAATATTGATGGAAGTTCAAAAGGCTCGAGCTGGTCGATTGGGGAACTAGAGCCCCACGGTTCATCATATGTTGAAGAAAAATTGCAAAGAAATGTTAGTGATGTTGGAATCATCACTCCCATGGATTATTTTGTGAAGAACTCGGTGGTGTCATTGCCTGCTCCAAGTGAAGCATCTAATGTGATGAGCTTGACAAGCAGTTGTTCTTCGTTATCGTTTGCGGACAAGGATCTCGATGCTGAACTCAAGATGGAAATCAATGCTATCGAGACACATTATCGGCAACTGTTTGACGAGCTATCACGAATGAGAGAGGAGGCACTAGAGGCCACCAGAAAGAGATGGATTGCAAAGAAGAAACTGATTCATTGA 2556 42.49 MGVVSHQHLVTSQLLQCFSSKLLMNSCKPILGFLGVPLPKSICAFNLQTNIGLPWCPLPEVWLYSIARLTVALSISFLLHSSIPLLFTILIRFSFPFSSFFPIPDPKQFLQDSGEFVYGMETGPATSNHSSSLPFVMECRFRLQSAFDSFCIASEAFSEHRRCRIPIWRHAFSSKNECLADPISALFGSMESPDTAAEKDPTGRYVRYDEILGRGAFKTVYKAFDEVDGIEVAWNQVRIDGFLQSPEDLEKLYSEVHLLKSLKHENIIKFYNSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQVLRGLVYLHSHDPPIIHRDLKGDNIFINGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDVYSFGMCMLEMVTFEYPYNECKNPAQIFRKVTSGIKPASLAKVSDPQTMEFINKCLVPAHERLSAKELLKDSFLQVENPKESARNPLQLPIQVPKSMNLPKSGPISMDIDIDHKQHSLSTYAESNSGSPHFPVVEFQTMNKNNEFRLRGNKNDENSVALTLRIADSNGRVRNIHFTFYLDSDTALSVAAEMAEQLELINHDVDFIAEFIDFLITKLIPGWKPLSVNSSNGESSLCGGPPILKSVKSSIGSPWGSMSTGIHDGLVEQDISSVLVCSTQKDCLQSERDGWADDIPSSHIFDTCPSSPSLANFEDLNSHASFASELLVEDCSTKSSKVFDCSNIDGSSKGSSWSIGELEPHGSSYVEEKLQRNVSDVGIITPMDYFVKNSVVSLPAPSEASNVMSLTSSCSSLSFADKDLDAELKMEINAIETHYRQLFDELSRMREEALEATRKRWIAKKKLIH 851
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1172140 1178171 - CaPI482276_05g000770.1 Cam05g0077 125481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0077 851 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 192 837 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cam05g0077 851 ProSiteProfiles Protein kinase domain profile. 206 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0077 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0077 851 SUPERFAMILY Protein kinase-like (PK-like) 208 508 IPR011009 -
Cam05g0077 851 SMART serkin_6 206 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0077 851 FunFam Probable serine/threonine-protein kinase WNK1 191 287 - -
Cam05g0077 851 Gene3D Transferase(Phosphotransferase) domain 1 289 468 - -
Cam05g0077 851 Gene3D Phosphorylase Kinase; domain 1 189 287 - -
Cam05g0077 851 FunFam probable serine/threonine-protein kinase WNK9 289 468 - -
Cam05g0077 851 Gene3D - 544 615 - -
Cam05g0077 851 CDD STKc_WNK 204 463 - -
Cam05g0077 851 Coils Coil 814 841 - -
Cam05g0077 851 Pfam Protein kinase domain 209 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0161 Cam-Chr1:1968351 Cam05g0077 Cam-Chr5:1172140 3.40E-175 dispersed
Cam03g0308 Cam-Chr3:4315165 Cam05g0077 Cam-Chr5:1172140 1.30E-137 dispersed
Cam05g0077 Cam-Chr5:1172140 Cam06g0998 Cam-Chr6:15480120 2.30E-126 dispersed
Cam05g0077 Cam-Chr5:1172140 Cam06g0620 Cam-Chr6:8446147 1.60E-127 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85148 PF00069 Pkinase 7.00E-53 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0077 K08867 - csv:101204101 1209.51