Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0162 ATGATTCCCCGGAATCCTCCATTGCTGGGGTTTTCCGATGAGGTCAATGCCCTTAAAACCTCTGATTTGCTTTCCTTAGTTCCTCCTCTTTCCCTCTCTGAATTGATCGAAGAAGAAGAAATGTCAGTTTACGACGCTGCATTTGTGAACACGGAGCTCTCTAAACCCACCTCGATTTTCGGCCTTCGTCTCTGGGTTGTTATCGGAATCTTTGTCGGAGCTCTAATAGTTCTCGCACTGTTTCTTCTTTCACTCTGCCTAACTTCTCGCAAGCGGAACCGCCATAAGAACCAAATCCGTTTTCCTAAGTCCACAACCCACCATTCTCCTCCTGCTGTTTCCAAAGAGATCCAGGAGATCGTCCACCACGCCGTGCCGGATCATCATCACCATGTTCAGCCGGAAATTCATGTCGAGATCGGGAAATTGGAGCATCGGGTTGTTTTCTCTGATAGACCTTCTAGTGGTGAGAGTAGAGGCACTGTGAGTGAAACTGCTTCTTTTGGATCTGGTACTGTTGGGCCTGAGGTTTCACACCTCGGTTGGGGCAGATGGTATACTCTCAGAGAGCTCGAGGCGGCCACTAATGGCTTGTGTGAAGAGAATGTGATTGGAGAAGGTGGATATGGGATCGTATATTTAGGCATTTTAGGAGATGGTACCAGAATTGCTATCAAGAATCTCTTGAATAACAGGGGTCAAGCTGAGAGGGAATTCAAAGTGGAAGTAGAAGCAATTGGACGCGTAAGACACAAGAATCTTGTCAGGTTGCTGGGATATTGCGTTGAGGGTGCATATAGAATGCTTGTTTATGAGTACGTTAACAATGGCAATTTAGACCAATGGCTTCATGGCGATGTTGGGGATGTGAGCCCTTTGACGTGGGAGATTCGTGTTAACATCATACTTGGCACAGCAAAGGGGTTAGCCTATCTCCATGAGGGTCTTGAACCAAAGGTTGTTCATCGTGATGTAAAATCAAGCAACATACTGCTTGATCGTCAGTGGAATGCTAAAGTATCTGATTTTGGGCTGGCCAAGCTTCTTTGTTCTGAAAGAAGCTATGTGACAACTCGTGTAATGGGCACATTTGGCTATGTTGCACCTGAGTACGCCTGCACTGGAATGTTGAATGAAAAGAGTGATGTTTATAGCTTTGGAATTCTGATTATGGAGATAATTTCCGGGCGGAGCCCTGTTGATTACAGTAGACCTCAAGGAGAGGTAAATTTGGTGGATTGGTTGAAAGCAATGGTTGGTGACAGAAAATCTGAGGAAGTGGTTGACCCCAAGTTGCCGGAGAAGCCTCCTTCCAAAGCTCTCAAACGTGTTTTGCTGGTTGCTCTTCGTTGTGTCGATCCTGATGCTACAAAGAGGCCGAAAATGGGACACGTCATTCACATGCTTGAGGCAGATAATTTGCTGTCTCATGATGAACACCGGGTTGGTAAGGACTCTTCTCATTCAATTCAAGGCCATCAACATGAGAACCGGGCCGTTCCAAGACGAGTTAACAATCAGAAAGATGAACAGGCATCTTCTAATGTATGTGAAGGTGACAGCGATGGAAACATTCACCATCCAACAAGTTTGGTAGAGACATCTCCAACTGTAACCTCTACTTCATGTGCTCTTTTGCTCTGTTCTGACTGGACCAGATCAGATCAATCCTTTGGTTTATCTGCAACCATACATTGTCTTTTCGAGGACTCTCTGTCAAACTCAAAGCCTTTGGGAGTTTCTTCAAAACCCCCTTATCCAAAGCTTGCTTTTAGAAGTTGGGGCCAAGTGTTATGCATCAAAGGTGAAGTTGAAACAAGCACAAAGCACTTGGTAGCTGTAGTTTATACTTGGAAGGGGTCAGGCTTGCAAAAACGTTTGTGTTCTCTTATTCAAGAAACATTGAGGTTTATAACAAAGGTGGCTACAATTGTGAATGATGTTCGAGGCCTTTTTGGTGTCCTTTGTCAAGTTAAGTTTATTCATTTCGGCCGTTGTGCTAAAGCCAAAGCCACTCATAATCCGCCACGTTTACTGCCAAAAGGCCTGGTAATCTGTCCATGTTTGGGGTTGGTTTCTGGAGGATTTTTTCATTCGTTCTGCTCTAAACGGATTGCTTGTTCGTTGATCTACGAATTGTTAGTGTTATATAATGAGCAGACCACAAGAGCCGCACCGGCCCTTCTTTCCTTTTGGGAATCCTTTCCGTGCAATATCACCAAAGGGTTCAAAATTGTCTTCTAG 2244 44.83 MIPRNPPLLGFSDEVNALKTSDLLSLVPPLSLSELIEEEEMSVYDAAFVNTELSKPTSIFGLRLWVVIGIFVGALIVLALFLLSLCLTSRKRNRHKNQIRFPKSTTHHSPPAVSKEIQEIVHHAVPDHHHHVQPEIHVEIGKLEHRVVFSDRPSSGESRGTVSETASFGSGTVGPEVSHLGWGRWYTLRELEAATNGLCEENVIGEGGYGIVYLGILGDGTRIAIKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVNNGNLDQWLHGDVGDVSPLTWEIRVNIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLNEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVDWLKAMVGDRKSEEVVDPKLPEKPPSKALKRVLLVALRCVDPDATKRPKMGHVIHMLEADNLLSHDEHRVGKDSSHSIQGHQHENRAVPRRVNNQKDEQASSNVCEGDSDGNIHHPTSLVETSPTVTSTSCALLLCSDWTRSDQSFGLSATIHCLFEDSLSNSKPLGVSSKPPYPKLAFRSWGQVLCIKGEVETSTKHLVAVVYTWKGSGLQKRLCSLIQETLRFITKVATIVNDVRGLFGVLCQVKFIHFGRCAKAKATHNPPRLLPKGLVICPCLGLVSGGFFHSFCSKRIACSLIYELLVLYNEQTTRAAPALLSFWESFPCNITKGFKIVF 747
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1791345 1798492 + CaPI482276_05g001620.1 Cam05g0162 125566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0162 747 MobiDBLite consensus disorder prediction 506 520 - -
Cam05g0162 747 CDD STKc_IRAK 204 470 - -
Cam05g0162 747 SMART serkin_6 198 469 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0162 747 ProSiteProfiles Protein kinase domain profile. 198 475 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0162 747 MobiDBLite consensus disorder prediction 151 170 - -
Cam05g0162 747 Pfam Protein tyrosine and serine/threonine kinase 201 468 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0162 747 MobiDBLite consensus disorder prediction 480 505 - -
Cam05g0162 747 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0162 747 ProSitePatterns Protein kinases ATP-binding region signature. 204 226 IPR017441 GO:0005524(InterPro)
Cam05g0162 747 FunFam Probable serine/threonine-protein kinase At1g01540 178 273 - -
Cam05g0162 747 PANTHER OS01G0323000 PROTEIN 47 511 IPR052232 -
Cam05g0162 747 Gene3D Phosphorylase Kinase; domain 1 180 273 - -
Cam05g0162 747 FunFam Putative receptor-like serine/threonine-protein kinase 274 484 - -
Cam05g0162 747 SUPERFAMILY Protein kinase-like (PK-like) 177 470 IPR011009 -
Cam05g0162 747 MobiDBLite consensus disorder prediction 480 526 - -
Cam05g0162 747 MobiDBLite consensus disorder prediction 154 170 - -
Cam05g0162 747 Gene3D Transferase(Phosphotransferase) domain 1 274 486 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1736 Cam-Chr1:30948296 Cam05g0162 Cam-Chr5:1791345 2.10E-167 dispersed
Cam05g0162 Cam-Chr5:1791345 Cam08g2079 Cam-Chr8:26348287 5.00E-170 dispersed
Cam02g0543 Cam-Chr2:6202243 Cam05g0162 Cam-Chr5:1791345 2.40E-141 transposed
Cam05g0162 Cam-Chr5:1791345 Cam05g0999 Cam-Chr5:9058338 2.20E-72 wgd
Cam05g0162 Cam-Chr5:1791345 Cam07g0821 Cam-Chr7:20608312 1.80E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85151 PF07714 PK_Tyr_Ser-Thr 3.50E-45 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0162 - - - 0.0