Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0167 ATGACGATGATGATTGGTCTATTTTGTAGTGAAGACAATTCTGGTTTGGGCCGAAGAAAATTTTACTTTTGGTTGGTGATTCACTGGGCCGAGCACTTACTTGGTGGGCCGGCCCAACACGAACCCGTTACACACCGACCCATTACCATCTGGAGTTATGGCTCATCCACCGCTGGATGGATCATCTCGCGGCAATGGAATGAACGTATCCGACGGTCTCAAATAAATTTAATCGTCTACGGCTTTGCTCACAATTCACAAGTTGTTGCTTCCAATTTTCTCGGCACAATCCCTTTGACATTGCGTTCCTCGCAAGGCAGGAACTCGTCTGAGGAGCTTTTAGGAGCTACATTTTCACTTCAATCGGATTCGTCCATAACAGATTTAGTATCTCAATTGATAAATCTTGTGTTCCTGTCTGGTTCTTACGGAGTTTACTGGACATACTATAAAGATGAATCTCACAGTTTGAAGAGCGCCTCTGCATGGCGTTTACATATCCCTAGTTATGGTACACGTCGCATTGGTACATTTGTGCCCGCATCGTCGTTGAAATACTGGAACACTATCCCTCTTACTTCTCTTGGAAATCTATCAAATTCTCGATTTTATTCATCGGCTTCGGGTAGGAAAGTTGATATAACTGGAGATACTGGTGTTCCGGCAGCTTCTGCGGGTGTTGAACCGGATATCAGTAACCCCCCTGATCTTGGAAAGGACTTGCTTGAAAGGGTTAAGGATGTCTGGCAGAGTGCCGTAGATGCAACATCTTATACCGGGCAGAAGGCTAAAGAAGTATCGGATGAATTATCTCCGCATGTAGATAAACTCTTCGATTCACATCCATATCTAAAAAATGTGATTGTTCCTGTAAGTATGACCTTGACTGCTACTCTTTTGGCTTGGGTGGTAATGCCCAGGCTTTTGAGGAGATTTCATAAGTATTCAATGCGAAGTCCTGTTGCCATACTATCTGGAAGCATACCCAGTGAGGAAATTCCATATGAGAAAAGTTTTTGGGGTGCACTTGAGGATCCTTTGCGATATCTTGTTACCTTCTTTGCTTTTTCTCAAATTGGCATGATGGTTGCACCAACTGCAGTAGCACCAGAGTTTGTTTCACAGGCATGCAGGGGGGCTGTAATCCTTTCCCTTGTCTGGTTTATTTATCGCTGGAAAACAAATGTGTTATCTCGAGCCTTGGCCACCCAGACTTTTGCAGGGCTTGATCGGGACAGGTTACTTACCATTGATAAAGTTTCATCTGTTGCTTTATTTGCTATTGGATTGATGGCTTTGGCCGAGGCATCTGGTGTGGCCGTTCAATCTATGTTGACAGTTGGTGGTATTGGAGGAGTGGCCACTGCTTTTGCTGCGAGGGACATTCTTGGTAATATTTTGAGTGGCTTAACAATGCAGTTTTCACAACCCTTCTCACTTGGAGATACAATTAAGGCTGGTGCTATCGAAGGTCAAGTTGTGGAAATGGGACTCATGACAACATCACTTTTAAGTGCTGAAAAATTTCCAATCGTTGTTCCAAATTCTCTGTTTTCTAGCCAGGTCATTATAAATAAGTCGCGGGCACAGTGGCGAGCAATCACAAAGAAAATTCCTTTGCAAGTTGATGATTTCAGTACAGTTTCTCAGATATCAGATGGTATTAAGAATATGCTTATGTCTCACCCTAAGGTGTTCTTGGGCAAAGAGGCTCCTTATTGTTTTCTCTCTCAAATTGAAAGTACATATGCAGAATTGACATTCGGTTGTAACCTTAAGAAAATGGGTAAAGAAGAATTGTTCTCTACAGAGCAAGATATTCTCCTTCAGTCAGTACACATCATTAAGGAGAATGGTGCAACCTTAGGTAGCACCATGTCAGATTGGACGAACAAAAAGGAAAATTGTTGTGAAATGAAAATAGCTGCAGGTTTGTCCAAGGTTGTAACTGATAGAGGGAATGAAAGAGTAAAGATGCTGGTCTGA 1986 42.7 MTMMIGLFCSEDNSGLGRRKFYFWLVIHWAEHLLGGPAQHEPVTHRPITIWSYGSSTAGWIISRQWNERIRRSQINLIVYGFAHNSQVVASNFLGTIPLTLRSSQGRNSSEELLGATFSLQSDSSITDLVSQLINLVFLSGSYGVYWTYYKDESHSLKSASAWRLHIPSYGTRRIGTFVPASSLKYWNTIPLTSLGNLSNSRFYSSASGRKVDITGDTGVPAASAGVEPDISNPPDLGKDLLERVKDVWQSAVDATSYTGQKAKEVSDELSPHVDKLFDSHPYLKNVIVPVSMTLTATLLAWVVMPRLLRRFHKYSMRSPVAILSGSIPSEEIPYEKSFWGALEDPLRYLVTFFAFSQIGMMVAPTAVAPEFVSQACRGAVILSLVWFIYRWKTNVLSRALATQTFAGLDRDRLLTIDKVSSVALFAIGLMALAEASGVAVQSMLTVGGIGGVATAFAARDILGNILSGLTMQFSQPFSLGDTIKAGAIEGQVVEMGLMTTSLLSAEKFPIVVPNSLFSSQVIINKSRAQWRAITKKIPLQVDDFSTVSQISDGIKNMLMSHPKVFLGKEAPYCFLSQIESTYAELTFGCNLKKMGKEELFSTEQDILLQSVHIIKENGATLGSTMSDWTNKKENCCEMKIAAGLSKVVTDRGNERVKMLV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1814606 1819576 - CaPI482276_05g001670.1 Cam05g0167 125571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0167 661 Gene3D - 373 475 - -
Cam05g0167 661 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 378 460 IPR011014 GO:0016020(InterPro)
Cam05g0167 661 SUPERFAMILY Sm-like ribonucleoproteins 461 526 IPR010920 -
Cam05g0167 661 Pfam Mechanosensitive ion channel, beta-domain 461 528 IPR006685 GO:0016020(InterPro)|GO:0055085(InterPro)
Cam05g0167 661 Gene3D - 477 525 IPR023408 -
Cam05g0167 661 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 256 633 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0167 K22047 - csv:101220483 868.226