Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0170 ATGGCATCAAGTTTGGGAGGGGCATCGATGTCACAAACAGATGATTTTGAGACGTTCACTCCAACGACTGATGTTGAGCCGCTAAAGAGGGCCTGGCGTAATGAGAAGGCTGCTCCTGAGATTCTACCCTTTGAGGGATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAGTCAATGGAAGAGACTATAGAGGAATATTCAAGAAGTGGTATCGATCCCCTAATTGTATCACTCTATCAAATGGATTTAGATAGGACACAGTTCTTGTTGAGATCGTATGTTAGGAGTCGTTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCCAAAGAAGAGATAACGTTTACTGATAGGTGTCGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACATTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACATATCCAGCTTGAGGATGAGGAAGAGAGGGCATCCAGTAGAATAGAGGAACCTTTTGAGATGGAGGCCAATCTTTCGACATGGGTGATGGAGACTATTTCATTGGCTGCTTGGATGCTAATTTCAACATTGGATGAGCTCATAAATGAAAGGAATGATAGAGCATTGAAGGCATTGGCAAAGGCTGGTGAGCCATTTCAATCTGATATTTCATGA 765 40.92 MASSLGGASMSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEGSLVGRIKEQIQSMEETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYVRSRLQKIEKYMLYILKSDELFRRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDILRQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANLSTWVMETISLAAWMLISTLDELINERNDRALKALAKAGEPFQSDIS 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1833989 1837298 - CaPI482276_05g001700.1 Cam05g0170 125574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0170 254 MobiDBLite consensus disorder prediction 1 21 - -
Cam05g0170 254 Pfam GINS complex protein helical bundle domain 75 138 IPR021151 -
Cam05g0170 254 CDD GINS_A_Sld5 24 142 IPR038749 -
Cam05g0170 254 MobiDBLite consensus disorder prediction 1 20 - -
Cam05g0170 254 PANTHER SLD5 PROTEIN 11 213 IPR008591 GO:0000727(PANTHER)|GO:0000811(PANTHER)|GO:0006261(InterPro)
Cam05g0170 254 SUPERFAMILY GINS helical bundle-like 20 154 IPR036224 -
Cam05g0170 254 Coils Coil 49 69 - -
Cam05g0170 254 FunFam DNA replication complex GINS protein SLD5 9 211 - -
Cam05g0170 254 Gene3D - 10 214 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0170 K10735 - csv:101210888 390.963