Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0236 ATGGAACTTCTGTCACGCCCCATTTCAGTTGCAGTTGTATTGCTTCTGATTTCCATTGTTGTAAGGCAAATTCTAGCTGGAAAGCTGAGGAAGAAGAAGTATCATCCAATTGCAGGCACTGTATTTCACCAGCTCCTCAATTTCCACCGGTTGCAAGATTACATGACTGATCTTGCTCGAAAGCATAAAACATACAGGCTTCTTGGGCCCTTCAGGAATGAGGTTTATACTTCTGACCCACCAAATGTTGAGTATATACTCAGAACCAACTTCGAGAATTTTGGCAAGGGGTCACATAACTACAGAATTCTCAGGGATCTTCTTGGCGATGGAATTTTCACAGTTGATGGAGAGAAGTGGCGTCAGCAGAGAAAGATTTCAAGCTATGAGTTCTCTACAAAAGTTCTGAGGGACTACAGTAGTGTCATCTTCCGGAAAACTGCTGTTAAACTAGCTAACATCGTGTCCGAAGCTGCTATTTCGAATCGAATAATTGATATTCAAGATCTGTTTATGAAAACAACTCTGGATTCAATATTTCATGTTTCATTTGGAATTGATCTAGATAGCTTGCATGGATCAAATGAAGAAATGAACAAGTTTTGCTCTGCTTTTGAAGCATCAAGTACAATGACACTCTGGCGATACGTTGATGTAATCTGGCCAATCAAGAAGGCTCTGAACATTGGGTCCGAAGCTATCTTAAAAGAGAACATGAAAATTGTTGATGAGTACATATATAAGCTCATTAGTAGCGCACTCGAACAGAGAGAAAAGTTAGGCGACAACGCTTTGATGAAAAGAGAGAATATAGTGTCGAGGTTTCTGCAAGCGGAAACGTCCGATCCAAAGTATCTAAGAGATATTATTCTTAATTTTGTAATAGCTGGAAAAGACACAACGGCAGTTACCCTTGCTTGGTTCATTTACATGCTTTGCAAGCATCCTGCAGTGCAGGAAAGAGTTGCTAGAGAGATCAAGGAAGTGACAAACGTTGAAGATGTTACCAATTTTGCGGAGTTTGCTGCAAGATTGACTGAAGAATCTCTAGAGAAGATGCAGTTTCTTACTGCAGCTATCAATGAAACGCTTAGACTCTATCCTGCTGTTCCAGTGGATGCAAAGATTTGCTTTTCCGACGATACACTTCCGGATGGATTCAGTGTGAGGAAAGGAGATATGGTGTCGTACCAGCCATATGCAATGGGTAGGATGAAATTCATATGGGGTGATGATGCCGAGGAATTCCGACCAGAGAGATGGTTTGATGGAGATGGAAATCTCCAGCCTCAGAGCCCTTTCAAATTTACAGCCTTTCAGGCAGGGCCACGAATTTGTCTGGGAAAAGAGTTTGCTTACAGGCAGATAAAAATCATCTCAGCTCTATTATTGAGCTGTTTTAAATTCAAAATGAGTGATGAGAAGAAAATTGTGCAGTATCAACCAATGATCAATCTTCTCATAAAAGGAGGCCTTCAAGTTTGTGCCATTCCTAGACGTCCTATGCCCTAA 1512 41.01 MELLSRPISVAVVLLLISIVVRQILAGKLRKKKYHPIAGTVFHQLLNFHRLQDYMTDLARKHKTYRLLGPFRNEVYTSDPPNVEYILRTNFENFGKGSHNYRILRDLLGDGIFTVDGEKWRQQRKISSYEFSTKVLRDYSSVIFRKTAVKLANIVSEAAISNRIIDIQDLFMKTTLDSIFHVSFGIDLDSLHGSNEEMNKFCSAFEASSTMTLWRYVDVIWPIKKALNIGSEAILKENMKIVDEYIYKLISSALEQREKLGDNALMKRENIVSRFLQAETSDPKYLRDIILNFVIAGKDTTAVTLAWFIYMLCKHPAVQERVAREIKEVTNVEDVTNFAEFAARLTEESLEKMQFLTAAINETLRLYPAVPVDAKICFSDDTLPDGFSVRKGDMVSYQPYAMGRMKFIWGDDAEEFRPERWFDGDGNLQPQSPFKFTAFQAGPRICLGKEFAYRQIKIISALLLSCFKFKMSDEKKIVQYQPMINLLIKGGLQVCAIPRRPMP 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2314175 2317270 + CaPI482276_05g002360.1 Cam05g0236 125640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0236 503 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 PANTHER CYTOCHROME P450 19 492 - -
Cam05g0236 503 Pfam Cytochrome P450 35 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 SUPERFAMILY Cytochrome P450 33 499 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0236 503 CDD CYP86A 63 492 - -
Cam05g0236 503 Gene3D Cytochrome P450 28 500 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0236 Cam-Chr5:2314175 Cam11g0930 Cam-Chr11:14600981 5.70E-109 dispersed
Cam05g0236 Cam-Chr5:2314175 Cam05g0239 Cam-Chr5:2369526 3.60E-140 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0236 - - - 0.0