Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0239 ATGGAACTGATTATCAATATCTTCGCCCTCATTTTCATCGTTCTCTCCCTCTTCTGTCTCTCCTTCTTCATTCTCCTCCTCCGAACGCTCGCCGGAAAGTCCATAACCAACTCCGACTACCCGCCGGTGTACGGCACCATTTACGGCCAGGCTTTCTACTTCAACAACCTGTACGACCATCTGACGGCGGTGGCAAAACGGCATAGAACCTTCCGACTGATCGGGACGGTGTACAGCGAGATATACACGGTCGATCCGAGAAACATCGAACAGATATTGAAGACGAAATTCGACAAGTACTCGAAAGGAAGGAAAGATGAAGAAGTGTGTGGGGATTTGTTCGGAGAGGGAATTTTTTTGGTGGATGGAGAAAAGTGGAAGCAGCAGAGGAAATTGGCGAGTTATGAATTCTCGACGAAGATTGTTAGGGATTTTAGTTGCTCTGTTTTCAGAAGAAATGCGGGTAAACTTGTTGGAATTCTTTGGGAGTTCTCCGCCATGGCTCGGGTCTTCGATGTCCAGGATTTGCTAATGCGATGCTCTTTGGATTCCATTTTCAAAGTTGGGTTCGGCGTCGATTTGAATTGCTTGGAGGAACCAAGCAAAGCAGGGAGCGGGTTCATGAAGGCCTTTGATGATTCTAGCGCTCAGGTTTTTTGGCGCTACATCGATCCTTTCTGGAAATTTAAAAGATTTCTCAACATTGGTTCCGAAGCTTCGTTTAGGAACAACCTCAAGGTAATCGATGCTTTTGTGCACCGGTTGATCAGTGCCAGGAGAAAATTGCTTCACCAACCAAATCTCAATGACAAAGAGGACATACTTTCGAGGTTTCTGATGGAAAGTGAGAAGGATCCGACAAGAATGAATGATCAATATCTGAGAGATATAGTCCTGAATTTCATGTTGGCTGGCAGGGATACAACTGCAGGAACTCTGTCTTGGTTCTTCTATATGCTATGCAAGAACCCTTTAATACAGGAAAAAGTTGCAGAAGAAGTGAGCCAAATTGTTGGGGTTCAAGGGGAAGAAGCTGATATAAATTTGTTCATACAAAACTTAACTGATTCAGCTCTTGATAAAATGCATTATCTCCATGCAGCATTGACAGAGACTCTAAGGCTCTACCCTGCTGTCCCTGTGGATGGAAGGACTGCAGAAATTGATGACATTCTTCCTGATGGCTATAAACTAAGAAAAGGGGATGGAGTATACTACTTGGCCTATTCCATGGGCAGGATGCCCTGCCTTTGGGGAGAAGATGCTGAAGATTTTAAACCAGAGAGATGGCTTGAAAATGGAACTTTTCGACCCGAATCGCCTTTCAAATTCATCGCATTTCATGCGGGTCCTCGAACGTGTTTGGGAAAGGATTTTGCTTATCGACAAATGAAGATAGTATCTGCTACACTGCTTCATTTTTTTCGATTCAAATTAGCCGATCCAACGAGAAATATAACTTATAGGATCATGCTTACCCTTCACATCGATGGAGGTCTCCCACTTCTAGCAATCCCAAGAGCAAGAAAATTTGCCTAA 1539 44.05 MELIINIFALIFIVLSLFCLSFFILLLRTLAGKSITNSDYPPVYGTIYGQAFYFNNLYDHLTAVAKRHRTFRLIGTVYSEIYTVDPRNIEQILKTKFDKYSKGRKDEEVCGDLFGEGIFLVDGEKWKQQRKLASYEFSTKIVRDFSCSVFRRNAGKLVGILWEFSAMARVFDVQDLLMRCSLDSIFKVGFGVDLNCLEEPSKAGSGFMKAFDDSSAQVFWRYIDPFWKFKRFLNIGSEASFRNNLKVIDAFVHRLISARRKLLHQPNLNDKEDILSRFLMESEKDPTRMNDQYLRDIVLNFMLAGRDTTAGTLSWFFYMLCKNPLIQEKVAEEVSQIVGVQGEEADINLFIQNLTDSALDKMHYLHAALTETLRLYPAVPVDGRTAEIDDILPDGYKLRKGDGVYYLAYSMGRMPCLWGEDAEDFKPERWLENGTFRPESPFKFIAFHAGPRTCLGKDFAYRQMKIVSATLLHFFRFKLADPTRNITYRIMLTLHIDGGLPLLAIPRARKFA 512
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 2369526 2375684 + CaPI482276_05g002390.1 Cam05g0239 125643
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0239 512 PRINTS E-class P450 group I signature 366 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 SUPERFAMILY Cytochrome P450 42 507 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 CDD CYP86A 69 500 - -
Cam05g0239 512 Pfam Cytochrome P450 54 483 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cam05g0239 512 PANTHER CYTOCHROME P450 22 500 - -
Cam05g0239 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cam05g0239 512 Gene3D Cytochrome P450 42 505 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0239 Cam-Chr5:2369526 Cam11g0930 Cam-Chr11:14600981 9.90E-109 dispersed
Cam05g0236 Cam-Chr5:2314175 Cam05g0239 Cam-Chr5:2369526 3.60E-140 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0239 - - - 0.0