Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cam05g0259 | ATGGACTTCCAAGCTCACTCTCTGAAAAGCTCCGACAATTCGTCAACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTGGGAGAAGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAATATGTTCCTGTATTAGTAGATGGTCCTGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGTATCTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCGTTTAAAATCTCTTAGTCTGCAAGTGGGAAGTATCATCAGCTCAAGCATACAGCCTGTCATAATGATGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTGCCATGGGCTCAGTCCAATTTAGAAAAAGGTTTCAATGCTCTTGAGAAACTGCTGAAGGATTTTTCTGGCCAATATGCCTTGGGAGATGAAGTATATATGGCTGATGTGTTTTTGGCCCCCCAAATTTCAAATGCTATTAAGAACTTCGACACTGACATGTCTAAGTTTCCTACCTTAGCAAGGATTTATGAATCTTACAAAAAGTTACCAGAATTCCAAGCCTCGTTCAATCATGTTATAAAGGTTGTCCGTCTAGCTCAATTAGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTTGCGCCCCACGCCCCATGGTGGGCGAAGGTTCAATATCAGTATCAAGATTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGAAGGTTCAACATCAATATCAAGATTGCCCCCCCACGGTGGGCGAAGGTTCAATATCAATATCAAGATTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGCGGGTTCACGGTGGGCGAAGGTTCAATCACATAATCAAGATTTTCTAGCTCAATAA | 1029 | 45.38 | MDFQAHSLKSSDNSSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRREQLSPDFERLNPLKYVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLRLKSLSLQVGSIISSSIQPVIMMGLLKTIEEKFGPEEQLPWAQSNLEKGFNALEKLLKDFSGQYALGDEVYMADVFLAPQISNAIKNFDTDMSKFPTLARIYESYKKLPEFQASFNHVIKVVRLAQLVERKALNLVVMGLRPTPHGGRRFNISIKIARLAQLVERKALNLVVVGSSPTVGEGSTSISRLPPHGGRRFNINIKIARLAQLVERKALNLVVAGSRWAKVQSHNQDFLAQ | 342 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2528972 | 2533104 | + | CaPI482276_05g002590.1 | Cam05g0259 | 125663 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cam05g0259 | 342 | Gene3D | - | 101 | 224 | - | - | |
Cam05g0259 | 342 | FunFam | Glutathione S-transferase Z1 | 18 | 102 | - | - | |
Cam05g0259 | 342 | AntiFam | tRNA translation | 262 | 284 | - | - | |
Cam05g0259 | 342 | Pfam | Glutathione S-transferase, N-terminal domain | 22 | 98 | IPR004045 | - | |
Cam05g0259 | 342 | FunFam | Maleylacetoacetate isomerase | 103 | 223 | - | - | |
Cam05g0259 | 342 | SUPERFAMILY | Thioredoxin-like | 18 | 102 | IPR036249 | - | |
Cam05g0259 | 342 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 104 | 240 | IPR010987 | - | |
Cam05g0259 | 342 | Gene3D | Glutaredoxin | 22 | 98 | - | - | |
Cam05g0259 | 342 | SFLD | Glutathione Transferase (cytosolic) | 20 | 210 | IPR040079 | - | |
Cam05g0259 | 342 | Pfam | Glutathione S-transferase, C-terminal domain | 144 | 216 | IPR004046 | - | |
Cam05g0259 | 342 | SUPERFAMILY | GST C-terminal domain-like | 100 | 221 | IPR036282 | - | |
Cam05g0259 | 342 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 18 | 99 | IPR004045 | - | |
Cam05g0259 | 342 | NCBIfam | maleylacetoacetate isomerase | 22 | 219 | IPR005955 | GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro) | |
Cam05g0259 | 342 | PANTHER | MALEYLACETOACETATE ISOMERASE | 18 | 220 | - | GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER) | |
Cam05g0259 | 342 | SFLD | Main (cytGST) | 20 | 210 | - | - | |
Cam05g0259 | 342 | CDD | GST_N_Zeta | 20 | 92 | IPR034333 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cam02g0038 | Cam-Chr2:1534050 | Cam05g0259 | Cam-Chr5:2528972 | 7.00E-68 | dispersed | |
Cam05g0259 | Cam-Chr5:2528972 | Cam05g0422 | Cam-Chr5:3847877 | 8.60E-08 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cam05g0259 | K01800 | - | csv:101213403 | 367.851 |