Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0259 ATGGACTTCCAAGCTCACTCTCTGAAAAGCTCCGACAATTCGTCAACGTCTTCGAAGCTGGTTCTTTATTCTTTCTGGCGGAGCTCCTGCTCGTGGCGTGTTCGCTTTGCGTTGAACCTCAAAGGGCTTTCTTACGAGTACAGAGCAGTAAACCTTGGGAGAAGAGAACAATTAAGTCCAGATTTTGAGCGCCTAAATCCTCTTAAATATGTTCCTGTATTAGTAGATGGTCCTGTGGTAGTTTCAGACTCTTACGCGATTTTGCTGTATCTGGAAGAGAAATATCCACAGAAGGCGCTGCTGCCTGCTGATCTTCGTTTAAAATCTCTTAGTCTGCAAGTGGGAAGTATCATCAGCTCAAGCATACAGCCTGTCATAATGATGGGATTGCTGAAAACTATCGAGGAAAAATTTGGTCCAGAAGAGCAACTGCCATGGGCTCAGTCCAATTTAGAAAAAGGTTTCAATGCTCTTGAGAAACTGCTGAAGGATTTTTCTGGCCAATATGCCTTGGGAGATGAAGTATATATGGCTGATGTGTTTTTGGCCCCCCAAATTTCAAATGCTATTAAGAACTTCGACACTGACATGTCTAAGTTTCCTACCTTAGCAAGGATTTATGAATCTTACAAAAAGTTACCAGAATTCCAAGCCTCGTTCAATCATGTTATAAAGGTTGTCCGTCTAGCTCAATTAGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTTGCGCCCCACGCCCCATGGTGGGCGAAGGTTCAATATCAGTATCAAGATTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGAAGGTTCAACATCAATATCAAGATTGCCCCCCCACGGTGGGCGAAGGTTCAATATCAATATCAAGATTGCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGCGGGTTCACGGTGGGCGAAGGTTCAATCACATAATCAAGATTTTCTAGCTCAATAA 1029 45.38 MDFQAHSLKSSDNSSTSSKLVLYSFWRSSCSWRVRFALNLKGLSYEYRAVNLGRREQLSPDFERLNPLKYVPVLVDGPVVVSDSYAILLYLEEKYPQKALLPADLRLKSLSLQVGSIISSSIQPVIMMGLLKTIEEKFGPEEQLPWAQSNLEKGFNALEKLLKDFSGQYALGDEVYMADVFLAPQISNAIKNFDTDMSKFPTLARIYESYKKLPEFQASFNHVIKVVRLAQLVERKALNLVVMGLRPTPHGGRRFNISIKIARLAQLVERKALNLVVVGSSPTVGEGSTSISRLPPHGGRRFNINIKIARLAQLVERKALNLVVAGSRWAKVQSHNQDFLAQ 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2528972 2533104 + CaPI482276_05g002590.1 Cam05g0259 125663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0259 342 Gene3D - 101 224 - -
Cam05g0259 342 FunFam Glutathione S-transferase Z1 18 102 - -
Cam05g0259 342 AntiFam tRNA translation 262 284 - -
Cam05g0259 342 Pfam Glutathione S-transferase, N-terminal domain 22 98 IPR004045 -
Cam05g0259 342 FunFam Maleylacetoacetate isomerase 103 223 - -
Cam05g0259 342 SUPERFAMILY Thioredoxin-like 18 102 IPR036249 -
Cam05g0259 342 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 104 240 IPR010987 -
Cam05g0259 342 Gene3D Glutaredoxin 22 98 - -
Cam05g0259 342 SFLD Glutathione Transferase (cytosolic) 20 210 IPR040079 -
Cam05g0259 342 Pfam Glutathione S-transferase, C-terminal domain 144 216 IPR004046 -
Cam05g0259 342 SUPERFAMILY GST C-terminal domain-like 100 221 IPR036282 -
Cam05g0259 342 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 18 99 IPR004045 -
Cam05g0259 342 NCBIfam maleylacetoacetate isomerase 22 219 IPR005955 GO:0003824(InterPro)|GO:0005737(InterPro)|GO:0009072(InterPro)
Cam05g0259 342 PANTHER MALEYLACETOACETATE ISOMERASE 18 220 - GO:0004364(PANTHER)|GO:0006559(PANTHER)|GO:0006749(PANTHER)|GO:0016034(PANTHER)
Cam05g0259 342 SFLD Main (cytGST) 20 210 - -
Cam05g0259 342 CDD GST_N_Zeta 20 92 IPR034333 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam02g0038 Cam-Chr2:1534050 Cam05g0259 Cam-Chr5:2528972 7.00E-68 dispersed
Cam05g0259 Cam-Chr5:2528972 Cam05g0422 Cam-Chr5:3847877 8.60E-08 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0259 K01800 - csv:101213403 367.851