Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0285 ATGCTCTCTTCACATTTCCTACCTTCGAAAAACCCTATTTCCACCAACCCCACTTCCCCTTTTTCCCTATTTTACCCAAATCTCCTCCCAACCGTCCGATCGAAATCTACCAATCGCCCACAAATCTCTGCCTTCTCCACCATTAATGGCGTCTCTTCAAAACCCACGTCTCAGATTCTCAATCCAATCCCCAAATCGAGCAGATTCTGCAAAAATCCAGTGAACCCATTGCGGTTTCTTCCGTGCAAACCTAAACCCTTTGTCCCCGCCGCCGCTGCCGCAGACGGCGGCGATACCACCGCTGATTCCGCCTCCAATGGTAAAACCTTTCAGCTCGCCATCGTCTTTGGGCTCTGGTATTTTCAGAACATCGTCTTCAATATCTACAACAAGAAGGTTCTCAACATTTTCCCTTTCCCATGGCTTCTCGCTTCGTTTCAACTCTTCGCTGGATCGGTTTGGATGCTCGTTCTTTGGTCCTTTAAGTTTCAGCCATGCCCTAAAATCTCAAAGCCCTTTCTAATCGCTCTCCTCGGCCCCGCTTTGTTTCACACAATCGGCCATATCTCTGCCTGCGTTTCGTTCTCAAAAGTCGCCGTTTCTTTCACTCATGTCATTAAATCGGCCGAACCGGTCTTCTCGGTTCTTTTCTCCTCGTTCCTCGGCGATTCGTATCCAATCCAGGTCTGGCTTTCGATTCTCCCCATTGTTTTTGGCTGCTCTTTGGCCGCCATTACTGAAGCTACCTTCAATTTTGAAGGTCTATCAGGCGCCATGATTAGCAATGTAGGGTTTGTGTTAAGAAACATTTACTCCAAAAGGAGCTTGCAGAACTTCAAGGAGGTTAATGGGTTGAATTTATATGGGTGGATTAGTATAATTTCTTTGTTGTATCTGTTTCCTGTGGCCATTTTCGTCGAAGGGTCAAAATGGGTTCAAGGATATCATCAAGCAATTGCTTCCATTGGAAATGCTTCAACATTATATATCTGGGTTTTGATTTCTGGCATATTTTATCATCTTTATAATCAATCTTCGTACCAAGCTTTGGATGAGATCAGTCCTTTGACATTCTCTGTTGGGAATACAATGAAGAGAGTGGTTGTGATTGTGGCTTCTGTTTTGGTTTTTAGAAATCCAGTTAGGCCTTTAAATGCTGTTGGTTCTGCCATTGCCATTTTTGGGACTTTTCTGTATTCTCAGACAACAACTAAAAAGAGTACTAAGAAGATTGAGGAAGGTGAAAAGAAGGAATGA 1257 44.07 MLSSHFLPSKNPISTNPTSPFSLFYPNLLPTVRSKSTNRPQISAFSTINGVSSKPTSQILNPIPKSSRFCKNPVNPLRFLPCKPKPFVPAAAAADGGDTTADSASNGKTFQLAIVFGLWYFQNIVFNIYNKKVLNIFPFPWLLASFQLFAGSVWMLVLWSFKFQPCPKISKPFLIALLGPALFHTIGHISACVSFSKVAVSFTHVIKSAEPVFSVLFSSFLGDSYPIQVWLSILPIVFGCSLAAITEATFNFEGLSGAMISNVGFVLRNIYSKRSLQNFKEVNGLNLYGWISIISLLYLFPVAIFVEGSKWVQGYHQAIASIGNASTLYIWVLISGIFYHLYNQSSYQALDEISPLTFSVGNTMKRVVVIVASVLVFRNPVRPLNAVGSAIAIFGTFLYSQTTTKKSTKKIEEGEKKE 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2740126 2741382 - CaPI482276_05g002850.1 Cam05g0285 125689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0285 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 401 - -
Cam05g0285 418 Pfam Triose-phosphate Transporter family 111 400 IPR004853 -
Cam05g0285 418 PANTHER SOLUTE CARRIER FAMILY 35 108 402 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g1427 Cam-Chr1:27793135 Cam05g0285 Cam-Chr5:2740126 4.30E-62 dispersed
Cam05g0285 Cam-Chr5:2740126 Cam10g0516 Cam-Chr10:7641485 2.80E-85 dispersed
Cam05g0285 Cam-Chr5:2740126 Cam05g1627 Cam-Chr5:23270059 9.60E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0285 K15283 - csv:101219051 714.531