Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0289 ATGGAAGAAGAGCTGAAACTATTCAGAACGTGGTCGAGTCCGTTCCCTCTGAGGATAGTATGGGCGTTGAAATTGAAAGGATTAGAATACGATACCGTTTACGAAGATCTGGCCAACAAGAGCCCCTTGCTTTTGGAGTACAATCCGATTCATAAGAAAGTTCCGGTGCTCGTCCATGGCGGAAAGCCGATCGCCGAATCGCTCGTTATTCTTGAATACATCGACGAAACATGGAAGCAAAATCCATTGCTGCCTCAGGATCCTTACCAGAGAGCCGTTGCTCGCTTTTGGGCCAAATTTGGGGATGACAAGGTTTTGGAATCTATAAAGAAAGTGTTTATGAACCAAGGGAAAGTGAGAGAGGAAGGTGTGGAAGAAGCCTTGGAGAATTTGAAGCATTTGGAAGAAGAGTTAAAAGGAAAGAGATTCTTTGGAGGGGAGGCCATTGGGTTTGTGGATATTACGGTTGGGTGGCTTGCAAACATAGCAAGTGTAGTGGAGGAAGTTGTTGGAGTTGAACTGATAACTGAACAAAGGTTTCCCTTCTTGTCCAAATGGATAAAGGAATTTGCTGCCTCTCCAATCATCAATGAAAACTGGCCGCCTAGAGACAAGCTTGTCACTAAGTACCAAGCAATGCGTCAAACTTTTATGAATAAACAAGCATAA 669 43.95 MEEELKLFRTWSSPFPLRIVWALKLKGLEYDTVYEDLANKSPLLLEYNPIHKKVPVLVHGGKPIAESLVILEYIDETWKQNPLLPQDPYQRAVARFWAKFGDDKVLESIKKVFMNQGKVREEGVEEALENLKHLEEELKGKRFFGGEAIGFVDITVGWLANIASVVEEVVGVELITEQRFPFLSKWIKEFAASPIINENWPPRDKLVTKYQAMRQTFMNKQA 222
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2752916 2755117 - CaPI482276_05g002890.1 Cam05g0289 125693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0289 222 SUPERFAMILY Thioredoxin-like 5 104 IPR036249 -
Cam05g0289 222 FunFam Tau class glutathione S-transferase 1 86 - -
Cam05g0289 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cam05g0289 222 FunFam Tau class glutathione S-transferase 84 220 - -
Cam05g0289 222 Gene3D - 84 221 - -
Cam05g0289 222 Pfam Glutathione S-transferase, N-terminal domain 4 76 IPR004045 -
Cam05g0289 222 Pfam Glutathione S-transferase, C-terminal domain 117 194 IPR004046 -
Cam05g0289 222 Gene3D Glutaredoxin 1 83 - -
Cam05g0289 222 SUPERFAMILY GST C-terminal domain-like 76 217 IPR036282 -
Cam05g0289 222 Coils Coil 121 141 - -
Cam05g0289 222 CDD GST_C_Tau 88 207 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cam05g0289 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 211 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cam05g0289 222 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cam05g0289 222 CDD GST_N_Tau 5 78 - -
Cam05g0289 222 SFLD Glutathione Transferase (cytosolic) 2 221 IPR040079 -
Cam05g0289 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 210 IPR010987 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam04g0776 Cam-Chr4:22073507 Cam05g0289 Cam-Chr5:2752916 9.20E-56 dispersed
Cam04g0777 Cam-Chr4:22079882 Cam05g0289 Cam-Chr5:2752916 1.60E-50 dispersed
Cam05g0289 Cam-Chr5:2752916 Cam06g1590 Cam-Chr6:27372713 5.50E-56 dispersed
Cam05g0289 Cam-Chr5:2752916 Cam04g1263 Cam-Chr4:26581747 2.20E-41 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0289 K00799 - csv:101219529 411.764