Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0298 ATGGCGGGCTTAGATTTGGGCTCTGCTTCTCACTTTGTTCATCAACTTCAGCACCGTTCCGTCGATCTTCACCTGCAGCATCCGACGGATGTAGACGACGGTTCCGACCACCATCCGAACTCCGGCGGCGAAATCGTCGCCCGGCGGTCCAGGGGCAGACCGCCCGGTTCTAAAAATAAACCGAAGCCACCGGTTATTATTACCAGAGAAAGCGCTAACACCCTCCGAGCCCACATCTTGGAAGTCAACTCCGGTTGCGATGTCTTTGACTCCGTCGCCACTTATGCTCGGAAGCGCCAGCGTGGCATCTGCATCTTGAGCGGCACCGGCGCCGTCACCAACGTTACCTTACGGCAACCTGCATCAGCCGGTGCCGTTGTCACTCTCCCTGGCAGGTTCGAGATACTGTCTTTGTCGGGATCGTTCTTACCGCCACCGGCTCCACCGGGAGCTACGAGTTTGACTATCTTCCTTGCGGGTGGGCAAGGACAAATCGTCGGCGGGAATGTTGTTGGATCTTTGATTGCTTCTGGACCGGTGATCGTCATTGCGTCGTCGTTTACCAATGTTGCTTACGAGAGGTTGCCGTTGGACGAGGAGGAACAACCGTCGAACGGTGGTGGTGGGAGCCTTAGCAACCCGTTTCCGGACCCATCGGCCGGGTTGCCGTTCTTTAATCTACCGTCGAGCATGGCGGGGAATCAAAATCAGCTGCCGGTGGACGGATGGGGTGGAGGAAACTCCGGTGGGAGAGCATCTTATTGA 765 56.86 MAGLDLGSASHFVHQLQHRSVDLHLQHPTDVDDGSDHHPNSGGEIVARRSRGRPPGSKNKPKPPVIITRESANTLRAHILEVNSGCDVFDSVATYARKRQRGICILSGTGAVTNVTLRQPASAGAVVTLPGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQIVGGNVVGSLIASGPVIVIASSFTNVAYERLPLDEEEQPSNGGGGSLSNPFPDPSAGLPFFNLPSSMAGNQNQLPVDGWGGGNSGGRASY 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2841698 2842628 + CaPI482276_05g002980.1 Cam05g0298 125702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0298 254 CDD DUF296 76 185 IPR005175 -
Cam05g0298 254 Gene3D - 75 203 - -
Cam05g0298 254 MobiDBLite consensus disorder prediction 199 254 - -
Cam05g0298 254 MobiDBLite consensus disorder prediction 26 65 - -
Cam05g0298 254 MobiDBLite consensus disorder prediction 26 44 - -
Cam05g0298 254 MobiDBLite consensus disorder prediction 228 242 - -
Cam05g0298 254 FunFam AT-hook motif nuclear-localized protein 75 202 - -
Cam05g0298 254 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 35 206 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cam05g0298 254 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 188 IPR005175 -
Cam05g0298 254 ProSiteProfiles PPC domain profile profile. 72 214 IPR005175 -
Cam05g0298 254 SUPERFAMILY AF0104/ALDC/Ptd012-like 72 201 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0352 Cam-Chr1:3904616 Cam05g0298 Cam-Chr5:2841698 4.50E-69 dispersed
Cam05g0248 Cam-Chr5:2445376 Cam05g0298 Cam-Chr5:2841698 2.10E-57 dispersed
Cam05g0298 Cam-Chr5:2841698 Cam10g0169 Cam-Chr10:3301644 5.80E-78 dispersed
Cam10g0168 Cam-Chr10:3286195 Cam05g0298 Cam-Chr5:2841698 5.50E-13 wgd
Cam05g0298 Cam-Chr5:2841698 Cam06g0158 Cam-Chr6:3483999 5.60E-89 wgd
Cam05g0298 Cam-Chr5:2841698 Cam09g1197 Cam-Chr9:13079260 7.40E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0298 - - - 0.0