Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0333 ATGTTCCGACGAGCTTCCAGCCTTTTGGCCCGCTCTTTTCTCTCTGCAAGGACCAGATCCTACTCCACCGATCTGCCCGCAGCTGCTTCCACCGACGATGCCTTTGTCTCTGCCTGGAAGAAGGTGATCCCCAATATTGACCCTCCTAAAACTCCTCTCTCTTTCATGGCTCCTCGTCCTGCTACGCCTTCTTCCATCCCTTCTAAGCTCACTGTCAACTTCGTCCTTCCTTATGCCTCCGAACTCTCGGCCAAAGAGGTTGACATGGTCATAATTCCAGCAACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCCGAGTTAAAGCCAGGGGTTCTATCAGTACACGATGGGAGCGACATCAAAAAATACTTTGTCAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCTGTCGAAGCTGTGCCTGTAGATCAAATCGATGCTAGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCAACAGACTTGGAGAAAGCCGAAGCCCAAATTGGAGTTGACGTGCACAGTGCCCTGAATTCTGCCCTTACAGGATAG 603 50.25 MFRRASSLLARSFLSARTRSYSTDLPAAASTDDAFVSAWKKVIPNIDPPKTPLSFMAPRPATPSSIPSKLTVNFVLPYASELSAKEVDMVIIPATTGQMGVLPGHVATIAELKPGVLSVHDGSDIKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDASQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 200
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3140685 3142721 + CaPI482276_05g003330.1 Cam05g0333 125737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0333 200 Gene3D - 58 156 IPR036771 -
Cam05g0333 200 Coils Coil 165 185 - -
Cam05g0333 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 26 200 IPR001469 GO:0000275(PANTHER)|GO:0015986(PANTHER)|GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)|GO:0046933(PANTHER)
Cam05g0333 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Cam05g0333 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cam05g0333 200 Gene3D - 157 199 - -
Cam05g0333 200 FunFam ATP synthase subunit delta 157 199 - -
Cam05g0333 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986(InterPro)|GO:0045261(InterPro)|GO:0046933(InterPro)
Cam05g0333 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 70 141 IPR020546 GO:0015986(InterPro)
Cam05g0333 200 FunFam ATP synthase delta 59 156 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0333 K02134 - csv:101206104 361.303