Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0384 ATGGGTAGCGGAGAAAAGGTTTTCACCTTGAAGGAAGTCGCTGAGCACAACAATCACAAGGACTGTTGGCTCATCATCAGTGGCAAGGTATATGATGTGACCAAGTTCTTAGAGGACCATCCTGGTGGTGACGATGTTTTGTTATCAGCTACAGGAAAAGATGCAACCGACGACTTCGAAGACGTGGGCCACAGTGACAATGCAAGAGAGATGATGGATCAATACTATGTTGGGGAGATTGATGCTTCAACAATTCCAAAGAAGGTCGCCTACACACCTCCAAAGCAGCCTCATTACAATCAGGACAAGACATCCGAGTTCATCATCAAGCTTCTCCAATTCCTCGTCCCGCTTGCAATTTTGGGATTGGCAGTTGCCATACGCTTCTACACCAAACAAGCTTGA 405 46.42 MGSGEKVFTLKEVAEHNNHKDCWLIISGKVYDVTKFLEDHPGGDDVLLSATGKDATDDFEDVGHSDNAREMMDQYYVGEIDASTIPKKVAYTPPKQPHYNQDKTSEFIIKLLQFLVPLAILGLAVAIRFYTKQA 134
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3533029 3535401 + CaPI482276_05g003840.1 Cam05g0384 125788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0384 134 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037(InterPro)
Cam05g0384 134 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Cam05g0384 134 SMART Cyt_b5_2 8 81 IPR001199 -
Cam05g0384 134 FunFam Cytochrome b5 type B 3 85 - -
Cam05g0384 134 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Cam05g0384 134 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 6 90 IPR036400 -
Cam05g0384 134 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Cam05g0384 134 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Cam05g0384 134 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Cam05g0384 134 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Cam05g0384 134 PANTHER CYTOCHROME B5 5 131 IPR050668 GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER)
Cam05g0384 134 Gene3D - 2 86 IPR036400 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam01g0022 Cam-Chr1:631760 Cam05g0384 Cam-Chr5:3533029 1.00E-52 dispersed
Cam05g0067 Cam-Chr5:1113293 Cam05g0384 Cam-Chr5:3533029 1.10E-36 dispersed
Cam05g0384 Cam-Chr5:3533029 Cam06g0285 Cam-Chr6:4802720 3.30E-32 dispersed
Cam08g1498 Cam-Chr8:21197386 Cam05g0384 Cam-Chr5:3533029 1.20E-26 transposed
Cam06g0340 Cam-Chr6:5492104 Cam05g0384 Cam-Chr5:3533029 2.00E-09 transposed
Cam05g0384 Cam-Chr5:3533029 Cam06g0799 Cam-Chr6:10986942 4.60E-58 wgd
Cam05g0384 Cam-Chr5:3533029 Cam07g0188 Cam-Chr7:3080137 4.60E-50 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0384 K23490 - csv:101214209 275.404