Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0432 ATGAGGAGAAAGAGGAGAAATGGGAGAACTGATTCGTCTCTTTGCAGTCCTTTCGTCGTCCTCCTTTCTCTGAATTCCAAAAAAATGGATTCAGGGTTCTGCGCCGCCCATCTCTCTCAGCTTCTCGGCCCCAACACAACCAACGCCACCGCCGCTGCTAATTTCATCTGCGATCAGTTCACCACCGTCACCAACAACTTCTCCGACACCAAGAATGCCCTCGACAACACCTACCTTCTCTTCTCCGCCTACCTTGTCTTTTCTATGCAACTCGGCTTCGCCATGCTCTGCGCCGGCTCCGTCCGCGCCAAAAACACAATGAACATCATGCTCACCAATGTCCTCGACGCCGCTGCCGGCGGCCTCTTCTATTACCTTTTCGGCTACGCCTTCGCCTTCGGCTCCCCGTCCAATGGCTTCATCGGCCGCCATAACTTCGGTCTCACCTCCTTTCCGACCTCCACTGCCGATTACAGCTTCTTCCTCTACCAATGGGCCTTTGCGATCGCTGCCGCCGGGATTACCAGTGGATCTATCGCCGAGCGGACTCAGTTCGTCGCCTATTTGATTTATTCCTCTGTTTTGACTGGATTCGTTTATCCGGTGGTTTCTCACTGGTTCTGGTCTCCCGATGGTTGGGCTGGGGTTATGAAATCGGATGGCGGACTGTTGTTTGGATCGGGAGTTATCGACTTCGCCGGCTCCGGCGTCGTTCATATGGTTGGGGGAGTTGCTGGTCTATGGGGCGCGTTGATCGAGGGGCCGAGAATCGGTCGATTCGACCACACCGGCCGGTCGGTGGCTCTGCGAGGGCACAGCGCTTCTTTAGTCGTTCTCGGTACTTTCATGCTCTGGTTCGGATGGTACGGTTTCAATCCAGGTTCGTTCGCGAAGATTCTCGTCCCTTACACCACCGGAAACTTCTACGGCCAGTGGAGCGCCGTCGGACGGACGGCGGTCACCACCACGCTCGCCGGATGCACGGCGGCACTCACCACGCTCTTCGGGAAGCGATTCCTCTCAGGGCACTGGAACGTGACGGACGTTTGCAACGGGCTCCTTGGGGGCTTCGCCGCCATCACCGCCGGCTGCTCCGTCGTCGAGCCATGGGCAGCAATCATTTGCGGATTCGTCGCCGCTCTCGTGCTAATAACCTGCAACCGAATCGCAGAGAAAGCAAAATACGACGATCCATTAGAAGCCGCTCAACTCCACGGCGGTTGCGGCGCGTGGGGAGTTATATTCACAGCACTCTTCGCAACGAAGGAGTACGTAACGGAAGTATACGGCGGATCGGGGCGTCCGTACGGACTCCTGATGGGCGGCGGCGGGAGGTTACTGGCAGCGCATTTGGTACAGATTTTGGTGATCGTGGGGTGGGTGAGCGCAACGATGGGGCCATTGTTCTTTGTTCTTCACAAATTGAAGCTTCTGAGAATCTCCTCTGAAGATGAAATGGCGGGAATGGATCTGACCCGCCATGGCGGATTTGCGTACATTTATCATGATGAAGATGAAGCCCAGAAAATGGGGATTCAGTTGAACAGAGTAGAACCTAAATCTGTAACTCCAACCGGAGATTATTGA 1587 55.45 MRRKRRNGRTDSSLCSPFVVLLSLNSKKMDSGFCAAHLSQLLGPNTTNATAAANFICDQFTTVTNNFSDTKNALDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLFYYLFGYAFAFGSPSNGFIGRHNFGLTSFPTSTADYSFFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSVLTGFVYPVVSHWFWSPDGWAGVMKSDGGLLFGSGVIDFAGSGVVHMVGGVAGLWGALIEGPRIGRFDHTGRSVALRGHSASLVVLGTFMLWFGWYGFNPGSFAKILVPYTTGNFYGQWSAVGRTAVTTTLAGCTAALTTLFGKRFLSGHWNVTDVCNGLLGGFAAITAGCSVVEPWAAIICGFVAALVLITCNRIAEKAKYDDPLEAAQLHGGCGAWGVIFTALFATKEYVTEVYGGSGRPYGLLMGGGGRLLAAHLVQILVIVGWVSATMGPLFFVLHKLKLLRISSEDEMAGMDLTRHGGFAYIYHDEDEAQKMGIQLNRVEPKSVTPTGDY 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3919826 3921412 - CaPI482276_05g004320.1 Cam05g0432 125836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0432 528 NCBIfam ammonium transporter 75 499 IPR001905 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam05g0432 528 SUPERFAMILY Ammonium transporter 72 480 - -
Cam05g0432 528 Pfam Ammonium Transporter Family 78 499 IPR024041 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam05g0432 528 FunFam Ammonium transporter 56 514 - -
Cam05g0432 528 ProSitePatterns Ammonium transporters signature. 231 256 IPR018047 GO:0008519(InterPro)|GO:0016020(InterPro)|GO:0072488(InterPro)
Cam05g0432 528 Gene3D Ammonium transporter AmtB like domains 53 518 IPR029020 -
Cam05g0432 528 PANTHER AMMONIUM TRANSPORTER 48 507 - GO:0005887(PANTHER)|GO:0008519(PANTHER)|GO:0072488(PANTHER)|GO:0097272(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0432 Cam-Chr5:3919826 Cam06g0773 Cam-Chr6:10410022 3.40E-237 dispersed
Cam05g0432 Cam-Chr5:3919826 Cam07g0144 Cam-Chr7:2589311 5.60E-200 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0432 K03320 - csv:101208366 910.983