Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0488 ATGGGAAGAGAACAACTACAAGTGTTGAACGCACTTGATGTGGCCAAAACACAATGGTACCATTTCACAGCCATTGTGATAGCTGGAATGGGCTTTTTCACAGACGCATATGATCTATTTTGTGTATCTCTTGTTACCAAACTATTGGGTCGAATTTACTATCACAAAGAAGGCTCAGACAAGCCTGGTGAATTGCCTTCAAACATAGCCGCCGCTATAAACGGCGTCGCTTTCTGTGGAACCCTCTCTGGCCAGCTCTTCTTTGGGTGGCTTGGTGACAAGATGGGCCGGAAACGAGTCTACGGAATGACCCTTATGCTTATGGTCATTTGCTCTGTAGCTTCCGGACTATCTTTCAGCAGCACCCCAACATCTGTGGTGGCCACTCTCTGTTTTTTCCGATTCTGGCTTGGATTTGGCATCGGCGGCGATTACCCACTTTCCGCCACCATCATGTCGGAGTATGCCAATAAAAGGACACGAGGGGCGTTCATTGCCGCTGTCTTTGCAATGCAAGGGTTTGGGATTTTGGCCGGTGGGGTGGTGGCAATAATTGTCTCTGCCGCATTTGACGCCAAATTCCCATCTCCATCGTATAAGGACAATCCCACCGCCTCAACCGTCCCACAAGCTGATTATGTGTGGCGAATTATTGTGATTTTTGGTGCCTTTCCGGCTCTACTCACTTATTACTGGCGAATGAAAATGCCTGAAACTGCTCGTTACACCGCCTTGGTTGCTAAAAATGCCAAACAAGCAGCCGCTGATATGTCTAAAGTTCTACAAGTTGAATTGGAATCAGAGCAGGAAAAAATCGACGAGGGAAAATCGAAGAATAATGACTTTGGGTTGTTCTCAATGAGTTTTGTTCGTCGGCATGGGCTTCACTTGCTAGGGACTACTACTACATGGTTCTTGTTAGACATTGCATTTTACAGTCAGAATCTATTCCAGAAGGACATTTTCACTGCCATTGGTTGGCTTCCTCCACCAGAGACGATGAACGCCATTGAAGAAGTTTTCAGAATCGCCAAAGCTCAAACCCTCATTGCATTGTGCAGTACAGTACCCGGGTATTGGTTCACTGTGGCGCTCATTGACGTAATGGGACGGTTTGCAATTCAATTGATGGGGTTTTTCTTCATGACGGTATTTATGTTCGCATTGGCCATTCCATACAAGCATTGGACTTTAGAAGCCAATAGAATTGGGTTTGTTGTGATGTATTCGTTAACGTTCTTCTTCGCGAATTTTGGGCCAAATGCCACCACTTTCGTGGTTCCAGCAGAGATATTTCCAGCCAGACTTCGATCGACGTGCCATGGAATATCGGCTGCTTCTGGAAAAGCAGGGGCAATTGTGGGGGCGTTCGGGTTTCAGTATGCTGAAAAGGGGATTGGAGTGAAGAAGACATTGATAATTCTTGGTGTTGTGAATGCTCTTGGTATGTTCTTCACTCTGTTGGTTCCGGAATCGAAGGGGAAGTCTTTGGAAGAAATGTCGGGTGAAGCTGGAGATGAGGCAGAGAGCAAAGCAGAGTCAAGGACTCAATCTGATCACAGAACTATGCCTGTTTGA 1578 46.32 MGREQLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCVSLVTKLLGRIYYHKEGSDKPGELPSNIAAAINGVAFCGTLSGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFSSTPTSVVATLCFFRFWLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGFGILAGGVVAIIVSAAFDAKFPSPSYKDNPTASTVPQADYVWRIIVIFGAFPALLTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELESEQEKIDEGKSKNNDFGLFSMSFVRRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFTAIGWLPPPETMNAIEEVFRIAKAQTLIALCSTVPGYWFTVALIDVMGRFAIQLMGFFFMTVFMFALAIPYKHWTLEANRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAASGKAGAIVGAFGFQYAEKGIGVKKTLIILGVVNALGMFFTLLVPESKGKSLEEMSGEAGDEAESKAESRTQSDHRTMPV 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4307355 4308932 - CaPI482276_05g004880.1 Cam05g0488 125892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0488 525 CDD MFS_PhT 25 493 - -
Cam05g0488 525 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Cam05g0488 525 Gene3D MFS general substrate transporter like domains 273 518 IPR036259 -
Cam05g0488 525 SUPERFAMILY MFS general substrate transporter 12 501 IPR036259 -
Cam05g0488 525 FunFam Inorganic phosphate transporter 1-6 20 515 - -
Cam05g0488 525 MobiDBLite consensus disorder prediction 498 525 - -
Cam05g0488 525 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 494 IPR020846 GO:0022857(InterPro)
Cam05g0488 525 NCBIfam phosphate:H+ symporter 11 503 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cam05g0488 525 Pfam Sugar (and other) transporter 26 501 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam05g0488 525 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 499 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0488 Cam-Chr5:4307355 Cam07g0118 Cam-Chr7:2381909 1.20E-234 dispersed
Cam11g0477 Cam-Chr11:6272911 Cam05g0488 Cam-Chr5:4307355 5.60E-06 dispersed
Cam05g0488 Cam-Chr5:4307355 Cam05g0490 Cam-Chr5:4323056 9.80E-229 proximal
Cam11g1914 Cam-Chr11:31597549 Cam05g0488 Cam-Chr5:4307355 1.40E-140 transposed
Cam05g0488 Cam-Chr5:4307355 Cam06g0711 Cam-Chr6:9628168 1.20E-231 wgd
Cam05g0488 Cam-Chr5:4307355 Cam07g0099 Cam-Chr7:2148986 2.90E-233 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0488 K08176 - csv:101209582 931.398