Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0490 ATGGCTCAAGAACTGGGAGTTCTAAATGCACTTGATGTTGCAAAGACCCAATGGTACCATTTCACAGCCATCATCATAGCTGGAATGGGGTTCTTCACCGATGCCTACGATCTTTTTTGCATTGCGGTCGTGTCGAAGTTGCTCGGTCGCATATACTACTACACGCCAGGGTCAGGGCGGCCGGGGTCACTTCCTCCAAACGTGTCGGCGGCAGTGAGTGGCGTGGCGCTTTGTGGAACTCTGAGCGGGCAACTGTTTTTCGGGTGGCTGGGTGACAAGATGGGAAGGAAGAAAGTGTATGGGATAACGTTGATTCTGATGGTGATATGTTCATTTGGGTCAGGGCTAAGTTTTGGGCACTCGGCCAAAGCAACATTGACAACATTATGTCTATTTCGGTTCTGGCTTGGGTTTGGGATTGGTGGTGATTATCCACTTTCCGCAACAATTATGTCCGAATATGCAAATAAGAAAACTCGTGGGGCTTTTATAGCAGCTGTTTTTGCCATGCAAGGTTTCGGAATTTTGGCTGGTGGGATCGTCGCTTTGATTGTTTCAGGTGCATTCAATAATAGATTCCCAGCTCCCTCATATGAGATTGACGCGGTGGGGTCAACCGTACCAGAGGCGGACTATGTATGGCGCATAGTTCTAATGTTTGGCGCCATCCCTGCCGGAATGACATACTACTGGCGTATGAAGATGCCGGAAACAGCCCGTTACACAGCTCTAGTGGCGAAGAATGCGAAACAAGCCGCGGCGGACATGTCGAAAGTGTTACAAGTAGAGGTGGAGGCAGAGGAAGAGAAGCTAGAGAAGATAGTAAGCACAACCAGAAACAACTTTGGCTTGTTTTCCAAACAGTTCCTCAAACGCCATGGCCTCCACTTGCTTGGAACCACAAGCACTTGGTTCTTACTCGACATTGCATTTTACAGCCAAAATCTCTTCCAAAAAGACATCTACACTGCAATTGGTTGGCTCCCTCCCGCAAAAACAATGAGCGGCCTCGAGGAGTGCTATCGTATCGCCAAGGCTCAGACGCTGATTGCACTTTGTGGGACTGTGCCCGGCTATTGGTTCACCGTGGCTCTGATTGATATTATTGGTAGATTCACTATCCAATTAATTGGGTTCATTATGATGACTATTTTCATGTTTGCCATTGCCATCCCTTACAACCATTGGATTTTGAAAGAGAATCGAATTGGGTTTGTGGTCATGTATTCCTTGACCTTTTTCTTCGCCAATTTTGGGCCTAATTCCACTACTTTCATTGTTCCTGCTGAAATATTCCCGGCAAGACTTAGGTCCACATGTCACGGCATCTCTGCTGCCGCCGGCAAGGCTGGTGCAATCATTGGTGCTTTTGGGTTCTTGTATGCAGCGCAGAATCCTGACCCGACAAAAACTGACCCAGGTTACCCACCGGGTATTGGTGTTAAGTACTCTCTTATTGCACTTGGTTGCATCAACTTCCTTGGTGGTTTACTCACCTTGTTAGTGCCCGAACCTAAAGGAAAATCACTTGAGGAGTTGACCGGAGAGAACGAGGCGCCGGAAGAAAATGTCGTCGGGCAACCACAAGTGTGA 1593 47.96 MAQELGVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCIAVVSKLLGRIYYYTPGSGRPGSLPPNVSAAVSGVALCGTLSGQLFFGWLGDKMGRKKVYGITLILMVICSFGSGLSFGHSAKATLTTLCLFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSGAFNNRFPAPSYEIDAVGSTVPEADYVWRIVLMFGAIPAGMTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVEVEAEEEKLEKIVSTTRNNFGLFSKQFLKRHGLHLLGTTSTWFLLDIAFYSQNLFQKDIYTAIGWLPPAKTMSGLEECYRIAKAQTLIALCGTVPGYWFTVALIDIIGRFTIQLIGFIMMTIFMFAIAIPYNHWILKENRIGFVVMYSLTFFFANFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIIGAFGFLYAAQNPDPTKTDPGYPPGIGVKYSLIALGCINFLGGLLTLLVPEPKGKSLEELTGENEAPEENVVGQPQV 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4323056 4325360 - CaPI482276_05g004900.1 Cam05g0490 125894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0490 530 Gene3D MFS general substrate transporter like domains 19 266 IPR036259 -
Cam05g0490 530 Gene3D MFS general substrate transporter like domains 270 528 IPR036259 -
Cam05g0490 530 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 8 512 - -
Cam05g0490 530 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Cam05g0490 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857(InterPro)
Cam05g0490 530 MobiDBLite consensus disorder prediction 511 530 - -
Cam05g0490 530 Pfam Sugar (and other) transporter 25 513 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cam05g0490 530 SUPERFAMILY MFS general substrate transporter 11 513 IPR036259 -
Cam05g0490 530 CDD MFS_PhT 24 506 - -
Cam05g0490 530 FunFam Inorganic phosphate transporter 1-6 19 526 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0490 Cam-Chr5:4323056 Cam06g0711 Cam-Chr6:9628168 1.40E-254 dispersed
Cam05g0488 Cam-Chr5:4307355 Cam05g0490 Cam-Chr5:4323056 9.80E-229 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0490 K08176 - csv:101213007 969.148