Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0511 ATGAAACTTTCTCGTCTAAATTCCCTCCGGCGAGTTCAGTCCGGCGAGCTTATCATGAAGCTCCCCGACGACCACGACGATTCCAAAAGACCCCAATTCCCTCTCGATTCCACCTCTTACAAAATCATCGACGAAATTGGGATCGGCGTCAGCGCCGTCGTGTACAAAGCTATCTGCATTCCGATGAATTCTGCAGTTGTGGCCATCAAAGCCATCGATCTCGATCGATCACGAGCCGATTTCGATGACATTCGAAGAGAAGCCAAAATTCTCTCACTTCTCTCTCACCCCAATATTCTAAATGCTCACTGTTCTTTCACCGTCGATCGTCGTCTTTGGGTCGTAATGCCGTTCATGTCAGCTGGATCTTTACAGTCCATTATTACGTCGTCGTTTCCCGATGGCTTGCCGGAGCCCTGTATCGCCGTTGTTCTCCGGGAAATTCTACACGCTCTGTCTTACCTCCACGACCAAGGCCATCTCCACCGTGATATTAAAGCCGGCAACATTCTGATGGACTCAAATGGGTCTGTCAAGCTGGCTGATTTTGGAGTTTCGGCGTCGATTTTTGAGGCGAATTCAAAACAGGGGGTGTCAATTTCTCCACTATCGACATCGATGATGCTGAAGGAAGTCGCCGGAACGCCGTACTGGATGGCGCCGGAGGTGATTCACTCCCACAATGGGTATAGTTTGAAAGCGGATATATGGTCATTTGGAATCACGGCGTTGGAATTAGCCCATGGACGACCTCCTCTGTCTCATCTCCCTCCTTCCAAATCCCTGCTTCTGAAAATCACGCGGAGGTTTCGATTCTCCGATTACGAGAACCACCGCAACTGCAAGAACAAGAACAAATTCTCAAAAGGGTTTAAGGAATTGGTAGCCTCTTGCCTCGATCAAGAGCCATCGAGAAGACCCTGCGCTGAGAAATTGCTCAAACATCCGTTCTTCAAAAACTGCAAGGGACCTGATCTTCTCGTAAAGACAATATTACAAGGTCTACCCAGCGTTGAGGAGCGATTCAAATTGGGGAAATTACAGCGATTGCCGTCGATGAAAACTGAGGAAGAGGAGGAGGAAGAAGAATTAGAGAAGGAGATTATAAAACAGAGGAGGATAAGTGGGTGGAATTTCAATGAGGATGGACTAGAGCTGGACCCTGTTTTTCCAGGGGAAAACTGCGAGGAAGAATGCTCGATCATAGAGGAGAAGGGTTCGGGGGATTTGAGCGAGTGGTGTTCTGGGTTGTCGGATCTAAGTTCGCCGGTGGGGAACGAGAGGGGCGGCGGCGGTGGCGGAGGGGAGGAGGAGGTTGTTGACAGGGAATCGATAGTGGGGGGATTGGTGGCGCTGAAAAGGAGCTTAGACGAGCAGAGGAGGGCGGTGGGGAGTTTGATAGAGCTGATAGAAGGGGAGAAAGGGGGAGAAATGAGCAGAGAGGAACAGATGGGGAGATTGATGGAGAAGATGACGAAGGAGTTGGAGAATGAGAGGAAGAGGAACTTTGAATTGGAAATGGAGTTGGAATTTCTTAGGCTTCAGATTTCTGCTGCTTATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGGTGGTAGTGGTGCTTCAACCGCCATTAATAACTGA 1662 47.41 MKLSRLNSLRRVQSGELIMKLPDDHDDSKRPQFPLDSTSYKIIDEIGIGVSAVVYKAICIPMNSAVVAIKAIDLDRSRADFDDIRREAKILSLLSHPNILNAHCSFTVDRRLWVVMPFMSAGSLQSIITSSFPDGLPEPCIAVVLREILHALSYLHDQGHLHRDIKAGNILMDSNGSVKLADFGVSASIFEANSKQGVSISPLSTSMMLKEVAGTPYWMAPEVIHSHNGYSLKADIWSFGITALELAHGRPPLSHLPPSKSLLLKITRRFRFSDYENHRNCKNKNKFSKGFKELVASCLDQEPSRRPCAEKLLKHPFFKNCKGPDLLVKTILQGLPSVEERFKLGKLQRLPSMKTEEEEEEEELEKEIIKQRRISGWNFNEDGLELDPVFPGENCEEECSIIEEKGSGDLSEWCSGLSDLSSPVGNERGGGGGGGEEEVVDRESIVGGLVALKRSLDEQRRAVGSLIELIEGEKGGEMSREEQMGRLMEKMTKELENERKRNFELEMELEFLRLQISAAYNNNNNNNNNNNNNNNNNNNNNNGGSGASTAINN 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4563062 4564723 - CaPI482276_05g005110.1 Cam05g0511 125915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0511 553 FunFam Serine/threonine-protein kinase BLUS1 29 118 - -
Cam05g0511 553 SMART serkin_6 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0511 553 Pfam Protein kinase domain 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0511 553 Coils Coil 481 515 - -
Cam05g0511 553 Coils Coil 347 374 - -
Cam05g0511 553 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524(InterPro)
Cam05g0511 553 SUPERFAMILY Protein kinase-like (PK-like) 39 335 IPR011009 -
Cam05g0511 553 Gene3D Transferase(Phosphotransferase) domain 1 122 372 - -
Cam05g0511 553 MobiDBLite consensus disorder prediction 522 553 - -
Cam05g0511 553 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 32 540 IPR047173 GO:0043539(InterPro)|GO:1902456(PANTHER)
Cam05g0511 553 Gene3D Phosphorylase Kinase; domain 1 29 118 - -
Cam05g0511 553 ProSiteProfiles Protein kinase domain profile. 40 318 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0511 Cam-Chr5:4563062 Cam05g0978 Cam-Chr5:8845141 2.30E-34 dispersed
Cam09g1954 Cam-Chr9:34212468 Cam05g0511 Cam-Chr5:4563062 3.40E-93 transposed
Cam10g0085 Cam-Chr10:2438802 Cam05g0511 Cam-Chr5:4563062 8.90E-87 transposed
Cam10g1392 Cam-Chr10:27576085 Cam05g0511 Cam-Chr5:4563062 7.90E-86 transposed
Cam11g1814 Cam-Chr11:30636702 Cam05g0511 Cam-Chr5:4563062 6.20E-51 transposed
Cam05g0511 Cam-Chr5:4563062 Cam06g0688 Cam-Chr6:9214412 2.20E-53 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85163 PF00069 Pkinase 3.80E-59 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0511 K08835 - csv:101215648 899.427