Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cam05g0571 ATGAATTCGAAAGGCAATGATATGGGGGGTTCTCCGGTCCCAAAGGAGACACAGAGCCAGGATAGAACTCTGAACTCAAAGGTGGCTGGTATGGGAAGCATTAGCAGCAAAGATATGATATTCAGAGCAGATATGATTGATTTGAAAACTCTAGATATGCAGCTAGAGAAGCACTTGAGCCGTGTCTGGTCAAAGAGCATTGTGAATCAAAGGCCTAAGGATGTGTGGGAGATTGATTTGTCTAAACTTGAGATCTTAAGGCTAGTTGCTCAAGGGACTTATGGAACAGTATACCGGGGTACATATGACAATCAAGATGTTGCAGTGAAGGTATTGGACTGGGGGGAGGAGGGTCTAGCCACAACGGCTGAAACTGCTGCTTTGCGGGCATCATTTCGGCAAGAGGTTGCTGTTTGGCACAAGCTTGATCATCCTAATGTTACAAAATTTGTCGGAGCTTCAATGGGAGCAACAAATCTTAAAATTCCAATGGATGAACAAAATTCGTTTCCATCTAGGGCCTGTTGCGTTGTTGTTGAGTTTGTTCCTGGTGGGACATTAAAACAATACTTGATTAGATTCTGTAGAAGGAAACTTAGCTTTAGGGAAGTGATTAAATTAGCTTTGGAACTCTCTAGAGGGCTTAGCTATCTACACTCCAAGAAGATTGTGCATCGTGATGTCAAAACTGAAAATATGTTGATGACAAGTGACTACGCTGTCAAAATTGCTGATTTTGGGGTTGCCCGTGTTGAAGCTCAGAATCCAAGAGATATGACTGGGGAAACTGGTACTCTTGGATACATGGCCCCAGAGGTTCTTCAAGGGAAGCCATACAATAGAAGATGTGATGTCTATAGCTTTGGCATCTGCTTGTGGGAAATTTACTGCTGTGATATGCCATACGCTGATCTTAGTTTTGCTGACGTGTCATCTGCAGTTGTTCGACAGAATCTGCGACCCAGTATCCCGAGATGCTGTCCAAGTTCTCTGGCAAATGTGATGAAGAAATGCTGGGATGCGAATCCAGCCAAACGCCCTGAAATGCATGAGGTTGTCAAAATGTTGGAAGCCATTGATACAAGCAGAGGAGGGGGGATGATTTCTCCTGATGACACTAGCTGTTTATGTTTCAGGCCTTTCGGCAAGGTCCGTGGACCATAA 1164 44.16 MNSKGNDMGGSPVPKETQSQDRTLNSKVAGMGSISSKDMIFRADMIDLKTLDMQLEKHLSRVWSKSIVNQRPKDVWEIDLSKLEILRLVAQGTYGTVYRGTYDNQDVAVKVLDWGEEGLATTAETAALRASFRQEVAVWHKLDHPNVTKFVGASMGATNLKIPMDEQNSFPSRACCVVVEFVPGGTLKQYLIRFCRRKLSFREVIKLALELSRGLSYLHSKKIVHRDVKTENMLMTSDYAVKIADFGVARVEAQNPRDMTGETGTLGYMAPEVLQGKPYNRRCDVYSFGICLWEIYCCDMPYADLSFADVSSAVVRQNLRPSIPRCCPSSLANVMKKCWDANPAKRPEMHEVVKMLEAIDTSRGGGMISPDDTSCLCFRPFGKVRGP 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5078765 5081410 + CaPI482276_05g005710.1 Cam05g0571 125975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cam05g0571 387 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 PRINTS Tyrosine kinase catalytic domain signature 327 349 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 CDD STKc_MAP3K-like 89 356 - -
Cam05g0571 387 ProSiteProfiles Protein kinase domain profile. 83 359 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 44 357 IPR051681 GO:0004674(PANTHER)|GO:0005886(PANTHER)
Cam05g0571 387 Gene3D Transferase(Phosphotransferase) domain 1 182 367 - -
Cam05g0571 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 Pfam Protein tyrosine and serine/threonine kinase 84 356 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 SUPERFAMILY Protein kinase-like (PK-like) 61 356 IPR011009 -
Cam05g0571 387 Gene3D Phosphorylase Kinase; domain 1 73 166 - -
Cam05g0571 387 SMART serkin_6 83 359 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cam05g0571 387 MobiDBLite consensus disorder prediction 1 27 - -
Cam05g0571 387 FunFam Kinase suppressor of Ras 1 72 166 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cam05g0571 Cam-Chr5:5078765 Cam10g1252 Cam-Chr10:25943712 5.30E-139 dispersed
Cam05g0571 Cam-Chr5:5078765 Cam09g0709 Cam-Chr9:7040973 2.40E-160 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
85167 PF07714 PK_Tyr_Ser-Thr 9.80E-61 CL0016 Cam PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cam05g0571 - - - 0.0